Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq15036 152 5e-32 >seq15036 Length=18609 Score = 152 bits (168), Expect = 5e-32 Identities = 185/252 (73%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || |||||| || |||||||| ||| |||||| |||| ||||||||||| || | | Sbjct 11828 TCTTACATCGCGGGAACCAATGGTTACTCGAACGGCATCGTTCCTATGCTCCGTGTATAC 11769 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || | | ||||| || |||||||||||||| | | ||| | ||||| || Sbjct 11768 GACTCCACCGCGCGGTATGTGGACCAGGGTGGCAACAAACGTCCTGGTGCCTTCGCTATC 11709 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || |||||||| ||||| || |||||| | ||||||||||| || |||||||||||| Sbjct 11708 TACCTCGAGCCATGGCATGCCGACGTGTTCGAGTTCATCGACCTCCGCAAGAACCACGGC 11649 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | ||| | |||||||||||||| | ||| | || || || || ||| Sbjct 11648 AAGGAGGAGGTCCGCGCCCGTGACCTCTTCTACGCCTTGTGGATCCCCGATCTGTTCATG 11589 Query 94309 AAACGCGTCGAG 94320 || ||||||||| Sbjct 11588 AAGCGCGTCGAG 11577 Score = 145 bits (160), Expect = 8e-30 Identities = 579/896 (65%), Gaps = 34/896 (4%) Strand=Plus/Minus Query 94531 AAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTC 94590 ||||| ||||||||| ||||||| |||||| || || || ||||| ||||| || Sbjct 11316 AAGTCGAACCAGCAGAACCTCGGTACCATCAAGTCATCCAACCTATGCACAGAGATCATC 11257 Query 94591 GAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACT 94650 |||||| | ||||| || |||| |||||| || || || | ||||| ||| || | Sbjct 11256 GAGTATTCCTCTCCCGATGAGACTGCTGTCTGCAATCTTGCTTCCATTGCCCTTCCCTCC 11197 Query 94651 TTCGTGCGAG-ATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTT 94709 ||| | |||| ||| | | ||| |||| | ||| | | ||| ||| | Sbjct 11196 TTCAT-CGAGGATGGCAAG-----TACAACTTCAAGA-AGCTGCACGCTGTTGCGAAGGT 11144 Query 94710 CGCGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCC 94769 || | | ||| ||||| ||| | | |||||| |||| ||||||| | || Sbjct 11143 CG---------TCGCCTTCAACCTCAACCGCATCATCGACGGCAACTACTACCCCATTCC 11093 Query 94770 GGAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGC 94829 || ||| ||| ||| || || || ||||||||||||||||| |||||| | || Sbjct 11092 CGAAGCGCGCCGCTCGAACATGCGCCACCGTCCCATCGGCATCGGCGTGCAGGGTCTTGC 11033 Query 94830 GGACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTT 94889 ||| || | || | | ||| |||| | ||||| ||||| ||| | | || | Sbjct 11032 GGATGCTTTTATGGCGCTCCGTATGCCGTTTGACTCCGTCGAGGCGCGGAAGCTCAACCT 10973 Query 94890 GAACATATTCGAAAGCATTTATTACGGGGCCAT-GAAACAATCCGTCCACTTGGCCAGAT 94948 | || | |||| || || | | || | ||| ||| | | | ||||| Sbjct 10972 ACAAATCTCTGAAACGATCTACCATGCCGCTGTTGAAGCAAGTTG-CGAGATGGCCCAGG 10914 Query 94949 CGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAA-CAGGGCATTTTTCAG 95007 | || || || ||||| ||| | | || | | ||| || ||| | ||| Sbjct 10913 CTGAAGGT---CCCTACGAAACGTAC-GAGGGTAGTCCTGCTTCTCAAGGCCAGCTGCAG 10858 Query 95008 TTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGA-AGCTCTACGCGCTGA 95066 | |||||| ||||| || | || ||| || | ||||||| ||| | | | | Sbjct 10857 TACGACCTGTGGGGCGTTACTCCAACGGACCTCTGGGACTGGGCTAGCCTCAAGTCCA-A 10799 Query 95067 TGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCAC 95126 || | | ||||| ||| ||| | || || || || |||||||| || |||||||| Sbjct 10798 GGTCGCCCAGCACGGCTTGAGGAACTCACTCCTCGTCGCGCCCATGCCTACAGCCTCCAC 10739 Query 95127 GGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAG 95186 | ||||||| || ||||||||||| | ||||| |||| |||| |||| | || | | | Sbjct 10738 GTCGCAGATTCTGGGCAACAACGAATGCTTCGAGCCCTACACCAGCAACATCTATACCCG 10679 Query 95187 GCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA-CCTGACGT 95245 || |||||||| || || |||| || | | ||||| || || | || || Sbjct 10678 TCGTGTGCTCGCGGGCGAGTTCCAGATCGTGTGCCCTTGGCTCCTCCGTGAGCTTGTCG- 10620 Query 95246 CTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGC---CAACGGCTCCG 95302 || || | ||| ||| | | |||||| || | ||| |||||| || | Sbjct 10619 AGCTCGGCCTCTGGAACGACGACATGAAGAAC---ATGATCATCGCCAACAACGGGTCTG 10563 Query 95303 TCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGA 95362 | ||||||||| || || |||||| | |||||| | |||||||| || ||||||| Sbjct 10562 TGCAGAACATCGACATCATCCCCGAGGACGTGAAGGCGATTTACAAGACTGTATGGGAGA 10503 Query 95363 TCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 || ||||| | | ||||||| || || | |||||| | |||||||||||| Sbjct 10502 TCTCGCAGAAGAAGGTCCTCGACCTGGCCGCGGACCGCGGCGCATTCATCTGCCAG 10447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494606303091880