Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq15036 125 7e-24 seq10137 107 2e-18 seq13613 104 2e-17 seq6477 95.1 1e-14 seq13655 86.0 6e-12 seq13619 86.0 6e-12 >seq15036 Length=18609 Score = 125 bits (138), Expect = 7e-24 Identities = 410/632 (65%), Gaps = 10/632 (2%) Strand=Plus/Plus Query 153039 TGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGAT 153098 || ||||||||||| | ||| || | ||| | ||||| ||| | || || ||| || Sbjct 10655 TGGAACTCGCCCGCGAGCACACGACGGGTATAGATGTTGCTGGTGTAGGGCTCGAAGCAT 10714 Query 153099 TCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAA 153158 ||||| ||||| || || || | ||||| || || |||||| ||| || | | || Sbjct 10715 TCGTTGTTGCCCAGAATCTGCGACGTGGAGGCTGTAGGCATGGGCGCGACGAGGAGTGAG 10774 Query 153159 TTCCGCAAGCCGTGC-GCTCGAATGTCGTCCTTCAACGCCTG-CCAATCCCACAGCGCCG 153216 |||| |||||||||| | ||| | | | | | || | ||| ||||| || ||| Sbjct 10775 TTCCTCAAGCCGTGCTGGGCGACCTTGGAC--TTGAGGCTAGCCCAGTCCCAGAGGTCCG 10832 Query 153217 ACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAA 153276 || || || ||||| ||||||||| | | ||| || || ||||| || | Sbjct 10833 TTGGAGTAACGCCCCACAGGTCGTACTGCAGCTGGCCTTGAGAAGCAGGACTACCCTCGT 10892 Query 153277 ACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGT 153336 |||| |||| || || ||||||| ||||| || || || | ||| ||| || Sbjct 10893 ACGTTTCGTAGGGACCTTCAGCCTGGGCCATCTCGCAACTTGCTTCAACAGCGGCATGGT 10952 Query 153337 ATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTCGTACGGCATGC 153396 | || ||||| | ||||||| ||||| ||| || || || ||||||| | Sbjct 10953 AGATCGTTTCAGAGATTTGTAGGTTGAGCTTCCGCGCCTCGACGGAGTCAAACGGCATAC 11012 Query 153397 GCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCT 153456 | ||| || ||| || || || |||||||| | |||| ||||||||| || || | Sbjct 11013 GGAGCGCCATAAAAGCATCCGCAAGACCCTGCACGCCGATGCCGATGGGACGGTGGCGCA 11072 Query 153457 CGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGT 153516 ||| ||| | ||| | ||||| |||| |||| ||||| || |||||||| Sbjct 11073 TGTTCGAGCGGCGCGCTTCGGGAATGGGGTAGTAGTTGCCGTCGATGATGCGGTTGAGGT 11132 Query 153517 TGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGA 153576 || | || || || | | || | || |||| ||| | || | || |||| Sbjct 11133 TGAAGGCGACGACCTTCGCAACAGCGTGCAGCTTCTTGAAGTTGTACTTGCCATCCTCGA 11192 Query 153577 CGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGT 153636 | | | | || | |||||| || || ||||| ||||| || ||||| |||| Sbjct 11193 TG---AAGGAGGGA---AGGGCAATGGAAGCAAGATTGCAGACAGCAGTCTCATCGGGAG 11246 Query 153637 CGCTGTACTGCACGATCTCGGCGCAGAGGTTG 153668 | |||| | |||||| | ||| |||||| Sbjct 11247 AGGAATACTCGATGATCTCTGTGCATAGGTTG 11278 >seq10137 Length=11321 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || || |||||||| | |||||| |||||| || || ||||||| | Sbjct 3311 GACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCGGCA 3370 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| ||||| || || || ||||| ||| || || | Sbjct 3371 AAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACG 3430 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||||| || | || || || |||| || || Sbjct 3431 TTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTC 3490 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 3491 ACGAAGATCTGCAT 3504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/197 (71%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| || || || |||||||| || ||||| | | Sbjct 3024 CTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGCTGCTTACCAGCGAA 3083 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| | ||||| ||||| || || ||||| || ||||| ||| | || | || | | Sbjct 3084 GATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTC-CTGAATCTTCGCCTTGACGT 3142 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA---GCGTTTTACCAGTCAGAGTT 138597 || || | ||||| | ||||||||||||| || | | | ||||| |||| || Sbjct 3143 TG-TCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTACCCGTCAACGTC 3201 Query 138598 TTTACAAAAATCTGCAT 138614 || ||||| |||||||| Sbjct 3202 TTGACAAAGATCTGCAT 3218 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||| || | || ||| ||||| || || || || | | Sbjct 2737 CTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAA 2796 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| |||||||| ||||| || || ||||| || ||||| ||| || || | ||| Sbjct 2797 GATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACATT 2856 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | |||||| | |||||| ||||| | || | ||| || || || || || || | Sbjct 2857 GT-CGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGA 2915 Query 138602 CAAAAATCTGCAT 138614 | ||||||||||| Sbjct 2916 CGAAAATCTGCAT 2928 >seq13613 Length=18521 Score = 104 bits (114), Expect = 2e-17 Identities = 117/154 (76%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTG-TTGGTGCAGCTCGGGCAGCC 52744 || |||||| | |||||||||||||| ||||| | ||| ||| ||| ||||| | Sbjct 17036 TCGATGTGCCAATACATCGAGTTTGTAGCGGACAGGCTGCTTGTTGCT-CTCGGAAATGA 16978 Query 52745 AAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAA 52804 ||| ||| |||| | || |||||||| || ||| ||| |||||||||||||| || Sbjct 16977 GAAGCACTACAACTCAAATAACCCGTTTGACTTCATGGACATGATTTCGCTTGAGGGGAA 16918 Query 52805 GACCAACTTTTTCGAGAAGCGAGTCGGCGAGTAT 52838 ||||||||| |||||||| || || ||||||| Sbjct 16917 GACCAACTTCTTCGAGAAACGGGTGTCCGAGTAT 16884 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 52341 AAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGC 52400 || ||||| | |||||| || ||||| | | |||| || | | || ||||| Sbjct 17432 AAGAAGGCCGACTGGGCATTGCGTTGGATAGCGGACGACCAGTCCGTGTTCGCTGAGCGA 17373 Query 52401 ATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTT 52460 ||||||| || || || |||||| | || || || || | |||||| ||||||| Sbjct 17372 CTGGTGGCGTTTGCGGCCGTGGAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTC 17313 Query 52461 TACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGC 52520 | | || | | || | |||||||||||||||||| |||||| | ||||||||| Sbjct 17312 TGGCTCAAGAAGCGTGGGCTCATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGC 17253 Query 52521 GACGAAGGACTGCACACGGACTTTGCGTGCCTC 52553 ||||| || |||| || ||||| || |||||| Sbjct 17252 GACGAGGGCATGCATACCGACTTCGCTTGCCTC 17220 >seq6477 Length=89905 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/197 (72%), Gaps = 10/197 (5%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||| | ||| || ||||||||| |||| | | Sbjct 6901 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAG-------CCGGCAAA 6849 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATT 138541 ||| |||||||| ||||| || || || || || ||||| ||| |||| | || | | Sbjct 6848 GATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTC-CTGAATTTTCGCCTTGACGT 6790 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | ||||||| |||||||||||||| || | || || || || || || || | Sbjct 6789 TATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGA 6731 Query 138602 CAAAAATCTGCATGGCT 138618 | || ||||||||| || Sbjct 6730 CGAAGATCTGCATGCCT 6714 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| |||||| || | || | | |||||||| ||||||||||| || Sbjct 7440 GCCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGA 7381 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||| | || || || | | |||| || || |||||||| || || Sbjct 7380 AAGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGG 7321 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || | || |||| || | ||| || | |||||| Sbjct 7320 AATGCCCTCCTTGTC-CTGAATCTTCGCCTTCACATTG-TCGATGGTATCCGAAGACTCC 7263 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | |||||| || || || || || || ||||||||||| Sbjct 7262 ACCTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| | |||||| |||||| | || || || | | Sbjct 7632 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGCTTCCCAGCGAA 7573 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||| || ||||| || || || || || || || ||||| ||| | || | || || Sbjct 7572 GATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTC-CTGAATCTTGGCCTTCACAT 7514 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | ||||| ||||| | ||| | ||| ||||| || || || || Sbjct 7513 TG-TCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTC 7455 Query 138601 ACAAAAATCTGCATGGCT 138618 |||||||| |||||| || Sbjct 7454 ACAAAAATTTGCATGCCT 7437 >seq13655 Length=683 Score = 86.0 bits (94), Expect = 6e-12 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52659 GTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGAT 52718 || | ||| | ||||||||| | || ||||||| | ||||||||||| || || ||| Sbjct 3 GTYGCGCTCATCGGCATGAACTCYAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGAT 62 Query 52719 CGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTT 52778 ||||| | || ||| || | ||| ||| | || ||| || || || || Sbjct 63 CGTCTACTCGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTC 122 Query 52779 ATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 ||| ||| || ||||| |||| ||||||||||| ||||||||||| ||| Sbjct 123 ATGGACATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTC 173 >seq13619 Length=8937 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || || || || | ||| | ||||||||| | || ||||||| | ||||||||||| Sbjct 818 GCACTTCCCGTTGCGCTCATCGGCATGAACTCCAAGCTCATGTGCCAATACATCGAGTTC 877 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCG 52769 || || |||||||| | || ||| || | ||| ||| | || ||| || Sbjct 878 GTCGCCGATCGTCTACTCGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCC 937 Query 52770 TTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 || || || ||| ||| || ||||| |||| ||||||||||| ||||||||||| ||| Sbjct 938 TTCGACTTCATGGACATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTC 997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496145139398160