Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq10137 116 4e-21 seq6477 113 4e-20 >seq10137 Length=11321 Score = 116 bits (128), Expect = 4e-21 Identities = 157/214 (73%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 126905 ACCAA-ATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| ||| | ||| ||| || ||||| ||||| ||| || |||||| ||| || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| ||||||| |||||||| || || || || |||||||||||| Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 3125 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA---CCG 127079 || ||| ||||| |||| |||| ||||||| | ||| || |||| ||| | | Sbjct 3126 AATCTTCGCCTTGACGTTG-TCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCT 3184 Query 127080 TTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || |||| || || ||||| |||||||| Sbjct 3185 TCTTACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || |||||||| | |||||| ||| || ||||| || || ||| | Sbjct 2737 CTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAA 2796 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | |||||||| ||||| || || |||||||||||| ||| ||| ||| | | Sbjct 2797 GATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACATT 2856 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| |||||||| |||||| || | ||| | ||| || || || || || || || Sbjct 2857 GTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 2916 Query 127102 AAAAATCTGCAT 127113 ||||||||||| Sbjct 2917 GAAAATCTGCAT 2928 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || |||||||| || | || || || || ||||| || || Sbjct 3308 GTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCG 3367 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| |||||||| ||||||||||||||| ||| ||| |||| Sbjct 3368 GCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 3427 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | ||| || |||| ||| | || |||||||||| || Sbjct 3428 ACGTTG-TCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGT 3486 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 3487 CTTCACGAAGATCTGCAT 3504 >seq6477 Length=89905 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||||| || | || | ||| ||||| || ||||| |||||||| Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | ||| || ||||| |||||| || || || || || || Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || ||| ||| | | |||| ||| |||| | ||| || Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACC 7260 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | |||||||||||| || || || || ||||||||||| Sbjct 7259 TCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || ||| || |||||| ||| || ||||| || || Sbjct 7128 GTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTCCCG 7069 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| |||||||| || ||||||||||| || ||| ||| Sbjct 7068 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTTCGCCTTA 7009 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| ||||||| | |||||| |||| || | ||| || ||||||| || Sbjct 7008 ACGTTG-TCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGT 6950 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || || ||||| Sbjct 6949 CTTCACGAAGATTTGCAT 6932 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| ||| | ||| || || || | ||| || |||||| | Sbjct 7632 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGCTTCCCAGCGAA 7573 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||||| ||||||||||| || || || |||||||||||| || || ||| | | Sbjct 7572 GATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 7513 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||||| ||| || || | || | ||| || || || || || || || Sbjct 7512 GTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCAC 7453 Query 127102 AAAAATCTGCATGGCT 127117 |||||| |||||| || Sbjct 7452 AAAAATTTGCATGCCT 7437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475388445104720