Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq13619 143 3e-29 seq15036 127 3e-24 seq13613 102 1e-16 seq5406 100 3e-16 >seq13619 Length=8937 Score = 143 bits (158), Expect = 3e-29 Identities = 345/514 (67%), Gaps = 15/514 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| | |||||||||||| |||||||| || |||||||| ||||| ||||| | || Sbjct 651 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGTGAGACCGGGCATCAAGCC 592 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | ||| || |||||||||||||| ||||| || Sbjct 591 GCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACCCAGAGAAGAAGATACCCTCGACCGC 532 Query 127651 CGCGAACGCAAATAGACGCTCGGC-AAAGGAGCGGGACTTTGTATC---AAACCACTTCA 127706 ||||| || | || ||||| || |||| | |||| ||||| | ||| | Sbjct 531 GGCGAAGGCGACAAGGCGCTCCGCGAAAGTA----GACTCCGTATCCGAGATCCAGCGGA 476 Query 127707 TCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 127766 ||||| | ||||| |||| ||| || |||| ||| | || || || ||||| | || Sbjct 475 GTGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTTCAATTGCATCGAAGAGGTGCT 416 Query 127767 -TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGG 127825 | | || || ||||||||||| | || ||||| || || |||||| |||| Sbjct 415 CACGCTGCT-TGGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTTTCGGAGTGG 357 Query 127826 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 127884 | | | ||| || | ||| | ||||||| |||| || || ||| ||||| Sbjct 356 ATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGGCCTGGACCTC 298 Query 127885 ATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 127944 | || ||| | || ||||| ||||| ||||| || | || || || || Sbjct 297 GTTGGAGAAACGTTCGACGAGGTTCTCGTTCACAATACCATCTGAGGCGGCGAAGAAGGC 238 Query 127945 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAG 128001 |||| || ||||| | | |||| ||||| | || | | ||| |||| ||| Sbjct 237 GAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGAGACGGTTGTGCCAATCGTGGAG 178 Query 128002 ATCCTTTGAGAGATCTACCTCCTCCGCAGTCCAA 128035 |||||| || ||||| | ||||||||| |||||| Sbjct 177 ATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAA 144 >seq15036 Length=18609 Score = 127 bits (140), Expect = 3e-24 Identities = 300/445 (67%), Gaps = 11/445 (2%) Strand=Plus/Plus Query 116551 GCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 116610 ||||||||||||||||| | || ||| ||||| | || |||| || ||||| | | Sbjct 11377 GCATCCTTGTAGAGCATGAAAGGGCCCCCGGTCTCAATCTGAGACTCCAGGATAGCGTAC 11436 Query 116611 CATA-CATCGGCGGCTGGCACAGTGG--CGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 116667 || | | || | | || | | || ||| || || ||||| |||||||| | Sbjct 11437 CAAAGCTTCTGAGCCTCG-ATGGTCTTCCGT--GCACGACCCTCACGCTCGTACTGCTCG 11493 Query 116668 TAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAG 116727 || |||||||| ||||| |||||| | |||| ||| || ||||||| | |||||| Sbjct 11494 TAAAGGGCCTCGAACTCGTCACCCCAAACCTCGTGGAGGCCAGGTGCCTCGTTGGGACAG 11553 Query 116728 AAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGC 116787 || || ||||||| |||||| |||| || ||||||||||| || || |||||||| | Sbjct 11554 AACAGTGACCATTTGCCACCCGCCTCGACGCGCTTCATGAACAGATCGGGGATCCACAAG 11613 Query 116788 GCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 116847 || ||||||| || || ||| | || || | || || || || | || | Sbjct 11614 GCGTAGAAGAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGATG 11673 Query 116848 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCG 116903 || || | | || || ||||| || || ||||| | |||| | ||| | | | Sbjct 11674 AACTCGAACACGTCGGCATGCCATGGCTCGAGGTAGATAGCGAAGGCACCAGGACGTTTG 11733 Query 116904 ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGAT 116963 | ||| |||||| ||||||| ||| || | || |||| || ||||| |||| ||| Sbjct 11734 TTG-CCACCCTGGTCCACATACCGCGCGGTGGAGTCGTATACACGGAGCATAGGAACGAT 11792 Query 116964 ACCATCAGATTGGCCATTTGTCCCC 116988 || | || | ||||| || ||| Sbjct 11793 GCCGTTCGAGTAACCATTGGTTCCC 11817 >seq13613 Length=18521 Score = 102 bits (112), Expect = 1e-16 Identities = 186/270 (69%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| || || ||||| || || ||||| ||| || |||||||| || |||||| Sbjct 17245 CCCTCGTCGCGCGATATGAGCTCGTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTC 17304 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| || | ||| | ||||||||||| || |||||||| ||| ||| Sbjct 17305 TTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAAC 17364 Query 127658 GCAAATAGACGCTCGGCAAA---GGAGCGGGACTTTG-TATCAAACCACTTCATCGCCCA 127713 || | || ||||| || || ||| || | | |||| ||| || ||||| Sbjct 17365 GCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCCGCTATCCAAC----GCAATGCCCA 17420 Query 127714 CTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 127773 | ||||| |||| |||||| || | ||| | ||| || || ||||| || ||| Sbjct 17421 GTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATTGCGTCGAAGAGGAAGGTCCGTTC 17480 Query 127774 TGATGGATCTTTGATGTACTTATCTATGAG 127803 |||||| |||| || |||| ||||| Sbjct 17481 GTCGGGATCTCTGATATAAGTATCGATGAG 17510 >seq5406 Length=1760 Score = 100 bits (110), Expect = 3e-16 Identities = 183/261 (70%), Gaps = 14/261 (5%) Strand=Plus/Minus Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCGAAGCTCGGAAACA-TCTTGATAATCCTTAC 176729 ||||||||| | |||||| |||||||| || ||| || || || || ||| ||| Sbjct 867 ATCCGTCATCAACATGAGACGACCATACCGCAGCCCGTCGACGCTCGTG-TAAGTCTTGT 809 Query 176730 CTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAG 176784 || || || || | |||||||||| | | || ||| | || |||| || | Sbjct 808 TGTGCTGCAGCCCTAGGATCTTCTTGATGTTCTGGATCTCCTCATTCTTCATGATCTG-G 750 Query 176785 TTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTA 176844 | | || | ||||||||||| || || ||||| || |||||||| ||||| Sbjct 749 TCGTGCTTC----GCGTCGCGGACGTTGAGCAGTTTTCCGCGAAGCGGGAACACGCCGTA 694 Query 176845 -GTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCT 176903 ||| |||||||| |||||| || ||||| | ||||| | ||| ||||| ||||||| Sbjct 693 CGTG-TCACGACCGACCACACCCAGCCCAGCGATCGCGAGCGCCTTGGCGGAGTCACCCT 635 Query 176904 CCGTCACGATGAGCGTACACT 176924 | || | |||||||||||||| Sbjct 634 CAGTGAGGATGAGCGTACACT 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613362235917480