Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq13613 141 1e-28 seq15036 113 7e-20 seq15381 86.0 1e-11 >seq13613 Length=18521 Score = 141 bits (156), Expect = 1e-28 Identities = 370/559 (66%), Gaps = 4/559 (1%) Strand=Plus/Plus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 ||||||||||| || |||||| |||| |||||||| || || |||| |||||| || Sbjct 17215 AACAGGAGGCAAGCGAAGTCGGTATGCATGCCCTCGTCGCGCGATATGAGCTCGTTTGAG 17274 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | | ||||| ||||||| ||||||| |||||||| || |||| |||||| |||| Sbjct 17275 AACGTCAGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAA-CACCC 17333 Query 160034 CTA-AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTT 160092 | || || || ||||||||||||||||||||||| || | |||| | || || | Sbjct 17334 AGAGAAGAATATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACACGGACTG 17393 Query 160093 GGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTC 160152 | ||| |||| | ||||| || |||||||| ||| || || ||| || Sbjct 17394 GTCGTCCGCTATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTATGGTTTC 17453 Query 160153 GACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTT 160212 || |||| || | | | | || | ||| |||| |||| | || || Sbjct 17454 GATTGCGTCGAAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTATCGATGAGGAG 17513 Query 160213 CGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGC 160272 ||||| | || | ||| || |||||||| ||||||||| ||| || || || Sbjct 17514 AGAGTAGGTCTCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAAGCATCGTGC 17573 Query 160273 CTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTC 160332 ||| ||| ||||| | | |||| | ||||||| | || || | ||||| Sbjct 17574 CTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTC 17633 Query 160333 GGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCT 160392 | ||| || ||||| || | ||| | ||||| ||| || | ||||| || |||| | Sbjct 17634 TGAGGCGGCGAAGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGTTTGTGAGCTT 17693 Query 160393 CTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA-ATTGGCAG 160451 | | ||||| | ||| || | | ||||| |||||| | |||| | || | | Sbjct 17694 CCCGTTCCAGTCGAAAAGGTCATGCGAAAGATCAATCTCTTCGACTGTCCAGAATGAC-G 17752 Query 160452 CCTGAGCAGTTTTGTACAT 160470 |||| || ||||||||| Sbjct 17753 CCTGGGCCCGTTTGTACAT 17771 >seq15036 Length=18609 Score = 113 bits (124), Expect = 7e-20 Identities = 369/563 (66%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || ||||||||||| ||||| || ||||||| ||| ||||| | |||||| | ||| Sbjct 10343 AGGTAGTACATGCCCGTCTTCAGACCCTTCTTCCAGCCGTAGAAATGCATGCTCGTCAGC 10402 Query 203945 TTGCTCACGTTGGGGTCGGC-----CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGA 203999 | | |||| ||||||| || ||| | ||| |||||||| ||| |||| Sbjct 10403 TGTC---CGTT--GGTCGGCGCTTGCAAGTGCACGTTGAGAGACTGCGACTGGCAGATG- 10456 Query 204000 AAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTC 204058 || ||||| || || ||||||| | || | |||||||||| |||||||| || ||| Sbjct 10457 AATGCGCCGCGGTCCGCGGCCAGGTCGAGGACCTTCTTCTGCGAGATCTCCCATACAGTC 10516 Query 204059 TTG-AACACGTC-TCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTG 204115 ||| || || | || || | | || || | | | || ||| | || |||||| Sbjct 10517 TTGTAAATCGCCTTCACGT-CCTCGGGGATGATGT--CGATGTTCTGCACAGACCCGTTG 10573 Query 204116 TCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGC 204175 | ||| || | | || || | || || ||| | ||| | | || ||||| || Sbjct 10574 TTGGCGATGATCATGTTCTTCATGTCGTCGTTCCAGAGGCCGAGCTCGACAAGCTCACGG 10633 Query 204176 ACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTG 204235 | || ||| | |||||| || || || | ||||| | ||||| | | |||| Sbjct 10634 AGGAGCCAAGGGCACACGATCTGGAACTCGCCCGCGAGCACACGACGGGTATAGATGTTG 10693 Query 204236 TTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGC 204295 ||||| | || ||||| ||||||||||| | |||||| | ||| ||| || ||| Sbjct 10694 CTGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGCGACGTGGAGGCTGTAGGC 10753 Query 204296 ATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAG 204355 ||||| || | ||| || ||||| | || |||| | |||| || ||| || Sbjct 10754 ATGGGCGCGACGAGGAGTGAGTTCCTCAAGCCGTGCTGGGCGACCTTGGACTTGAGGCTA 10813 Query 204356 GTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGA 204415 | |||||| | | | || | |||||||||| |||| |||| | ||||||| Sbjct 10814 GCCCAGTCCCAGAGGTCCGTTGGAGTAACGCCCCACAGGTCGTACTGCAGCTGGCCTTGA 10873 Query 204416 CTGACTGGGCTGCCCTTGTACGT 204438 | || || |||| |||||| Sbjct 10874 GAAGCAGGACTACCCTCGTACGT 10896 >seq15381 Length=32578 Score = 86.0 bits (94), Expect = 1e-11 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 159917 AGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATG 159976 ||||||||||| |||||| || || ||||||||||| ||||| |||||||| || | Sbjct 22593 AGGAGGCACGCGAAGTCGGTATGGAGCCCCTCGTCCCGCGAGATCAACTCGTTAGAGTGG 22652 Query 159977 ATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAG-CACCGCT 160035 | ||| ||||| | || || |||||||| || ||||||||||| | || | Sbjct 22653 CACAAGCCGGGCATCAAGCCCCGGCTCTTGAGCCAGAAGATGGCCGCAAAGGACAAAG-A 22711 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAG 160071 || || || |||||||| || || || || ||||| Sbjct 22712 GAAGAATATGCCCTCCACCGCTGCGAATGCGACGAG 22747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794967314765680