Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq10137 138 1e-27 seq6477 129 7e-25 seq17864 98.7 1e-15 >seq10137 Length=11321 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| |||||||||||||| || ||||| || |||| || |||||||| ||||| || Sbjct 3313 CTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCGGCAAA 3372 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | || |||||||||| ||||||| ||||| ||| Sbjct 3373 GATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 3431 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | |||||| || ||||| || | |||||||| ||||| |||| || || | Sbjct 3432 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCA 3491 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 3492 CGAAGATCTGCAT 3504 Score = 136 bits (150), Expect = 4e-27 Identities = 158/210 (75%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 ||||| | || |||||||| || || ||||||||||| || ||||| | || |||||| Sbjct 3010 AGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGC 3069 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 ||||| || ||||| ||||||||||||||||| | || | | |||||||||| ||| Sbjct 3070 TGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATC 3129 Query 46508 TTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG---TTTT 46563 ||| ||||| ||| | | | |||||| || ||||| || | ||||| | | || Sbjct 3130 TTCGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTT 3188 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| ||| || |||||||| ||||| Sbjct 3189 ACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 123 bits (136), Expect = 3e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || || | || |||||||| ||||| ||||| || || || |||||| | Sbjct 2713 ACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCC 2772 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| ||||| || | ||||||||||||| ||| | | |||||| Sbjct 2773 ATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTT 2832 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||||| ||| | | | | ||||| ||| || || |||| ||||| Sbjct 2833 GTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGAT 2892 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || ||||| || || || || || || ||||| Sbjct 2893 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 >seq6477 Length=89905 Score = 129 bits (142), Expect = 7e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 46388 AGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGC 46447 || || | ||| |||||||| ||||| ||||||||||| || || ||| |||| || | | Sbjct 7646 AGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAAC 7587 Query 46448 TGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATC 46507 ||||| || ||||| |||| ||||||||| || | ||| | | |||||||||| ||| Sbjct 7586 TGCTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATC 7527 Query 46508 TTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCC 46567 || ||| | | | | |||||| || || || |||| |||||| || || ||| Sbjct 7526 TTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCC 7467 Query 46568 GTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || ||||| |||||||| Sbjct 7466 GTGAGGGTCTTCACAAAAATTTGCAT 7441 Score = 104 bits (114), Expect = 3e-17 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||||| | ||| | || || || | || |||||| ||||||||||| || | Sbjct 6718 TGCCTCCTCGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCG 6659 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 | || ||||| |||| |||||||||||||| ||||| ||||||||||||||||||| Sbjct 6658 AGAGTGTGCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGG 6602 Score = 102 bits (112), Expect = 9e-17 Identities = 138/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||||| |||||||| |||| |||||| |||| || Sbjct 6901 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGC-------CGGCAAA 6849 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||| | ||| | || |||||||||| || ||| ||||| | Sbjct 6848 GATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTGACGTT 6789 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| ||||| || | ||||| || || ||||| || || || || Sbjct 6788 ATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGAC 6730 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 6729 GAAGATCTGCAT 6718 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| || |||||||| | ||||| | || || |||||||| |||||||| Sbjct 7123 CTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTCCCGGCGAA 7064 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | | ||||||||| |||||| ||| | ||| Sbjct 7063 GATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTTCGCCTTAA-CGT 7005 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || || || || | ||||| || || || |||| ||| || | Sbjct 7004 TGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGTCTTCA 6945 Query 46581 CAAAGATTTGCAT 46593 | ||||||||||| Sbjct 6944 CGAAGATTTGCAT 6932 >seq17864 Length=12555 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/200 (73%), Gaps = 8/200 (4%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | ||| | |||| | ||| ||||||||| |||||||| | Sbjct 12500 ACGCAGCACAAGGTGGAGTGTGCACTCCCTCCCGATGTTGTAGTCGCGGAGAGTGCGGCC 12441 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||| || || || || || || |||||||||| ||| | | |||||| Sbjct 12440 GTCTTCGAGCTGCTTTCCAGCAAAGATAAACCGTTGCTGGTCGGGCGGGATTCCCTCCTT 12381 Query 46498 GTCCATGA-TCTTCTTCTTGAG--CGTCGCCACCGTGTCG-CTCGATTCCACATCCACCG 46553 |||| || |||| | ||||| ||| | || |||||| | |||| ||| | | || Sbjct 12380 GTCCTGGATTCTTAAT-TTGAGAACGTTG--ACAGTGTCGTCGAGATTGCAC-TTGATCG 12325 Query 46554 TGATGGTTTTGCCCGTCAGC 46573 | | |||||||| |||||| Sbjct 12324 TCACTGTTTTGCCAGTCAGC 12305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565104841231560