Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq13613 295 7e-75 seq13619 269 3e-67 seq13643 145 8e-30 seq10137 127 2e-24 seq6477 96.9 3e-15 >seq13613 Length=18521 Score = 295 bits (326), Expect = 7e-75 Identities = 409/568 (72%), Gaps = 11/568 (2%) Strand=Plus/Plus Query 132879 ATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTC 132938 ||| | ||||| | |||||| |||||| ||||| ||||||||| | || ||||| || Sbjct 17208 ATGGTGGAACAGGAGGCAAGCGAAGTCGGTATGCATGCCCTCGTCGCGCGATATGAGCTC 17267 Query 132939 GTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAA 132998 ||| ||| |||| |||||||||||| || || || |||||||| || |||| ||| || Sbjct 17268 GTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAA 17327 Query 132999 ACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT 133058 || || || ||||| | |||||| |||||||| || |||||||| ||||| ||||| Sbjct 17328 ACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACAC 17387 Query 133059 GGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCAT 133118 || | | | || ||||| |||| ||||| |||||||| | |||| || || || Sbjct 17388 GGACTGGTCGTCCGCTATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTAT 17447 Query 133119 CGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTC--CGAGGAACGC--ACGTAGGTGT 133174 |||||||| |||| || | ||| || ||| || ||| | | | || || | Sbjct 17448 GGTTTCGATTGCGTCGAAGA---GGAAGGTCCGTTCGTCG-GGATCTCTGATATAAGTAT 17503 Query 133175 CGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAA 133234 |||||||| || || | |||||||| ||||| || || ||| ||||||||||||| Sbjct 17504 CGATGAGGAGAGAGTAGGTCTCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAA 17563 Query 133235 AGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGA 133294 |||| || ||||| | |||| || || | || || |||||||||||||| ||||||| Sbjct 17564 AGCATCGTGCCTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGA 17623 Query 133295 CGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGT 133354 | |||||||| ||||||||| ||||| ||||| | || ||| || |||||||||| Sbjct 17624 CAATGCCGTCTGAGGCGGCGAAGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGT 17683 Query 133355 ---CGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCC 133411 | | | | ||||||| ||| | || || || | ||| ||||| |||| Sbjct 17684 TTGTGAGCTTCCCGTTCCAGTCGAAAAGGTCATGCGAAAGATCAATCTCTTCGACTGTCC 17743 Query 133412 AAAACGACGCCTCGGCTTTTTTGTACAT 133439 | || ||||||| ||| ||||||||| Sbjct 17744 AGAATGACGCCTGGGCCCGTTTGTACAT 17771 >seq13619 Length=8937 Score = 269 bits (298), Expect = 3e-67 Identities = 399/562 (71%), Gaps = 9/562 (2%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| | |||||| || |||||| |||| |||||||| | || ||||| ||||| Sbjct 676 TGAAGAGCAAGCATGCGAAGTCGGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTCG 617 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | |||||||| | |||||| || |||||||| || || | || || | Sbjct 616 AGAACGTGAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACC 557 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||||| |||||||| || ||||| || || |||||||| |||| || | | Sbjct 556 CAGAGAAGAAGATACCCTCGACCGCGGCGAAGGCGACAAGGCGCTCCGCGAAAGTAGACT 497 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | | | ||||||||| || ||||| |||||||| | |||| ||| || || |||| Sbjct 496 CCGTATCCGAGATCCAGCGGAGTGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTT 437 Query 133124 CGATGGCGTTCAACAAACGGAGTTT-CTCTTCCGAGGAACGC--ACGTAGGTGTCGATGA 133180 | || || | || | || | | | || | || | | |||||||||||||| Sbjct 436 CAATTGCATCGAAGA---GGTGCTCACGCTGCTTGGGGTCTTTGATGTAGGTGTCGATGA 380 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || || || |||| ||||| | ||||||||| ||| || |||||||| ||||| | Sbjct 379 GGAGGGAGTAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGC 320 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | ||||| | |||| || || | | |||||| ||||| || || ||||| || || | Sbjct 319 GGGCCTCAGCGGCCTGGACCTCGTTGGAGAAACGTTCGACGAGGTTCTCGTTCACAATAC 260 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 | || ||||||||| ||||| || || || |||||| |||||||| | |||||| | Sbjct 259 CATCTGAGGCGGCGAAGAAGGCGAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGA 200 Query 133361 AGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 || | ||| ||| | |||||||| || |||| |||||| |||||||||| | Sbjct 199 GACGGTTGTGCCAATCGTGGAGATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAAAAGG 140 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 | |||||||| || |||||||| Sbjct 139 AAGCCTCGGCCTTCTTGTACAT 118 >seq13643 Length=1514 Score = 145 bits (160), Expect = 8e-30 Identities = 198/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||||||| || || | || ||||| ||||| || || ||| || || Sbjct 71 GTAAGTGTCGATGAGGAGAGAGTATGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAA 130 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||||||||| || ||||| | |||| || || | || || |||||||||||||| Sbjct 131 GCCGTAAAAGCATCGTGCCTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCAGATT 190 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| |||||||| ||||||||| ||||| ||||| | || ||| || || Sbjct 191 CTCGTTGACAATGCCGTCTGAGGCGGCGAAGAAGGCGAGCACATAAGAGAGGAAGTGCCG 250 Query 133347 CTCGTTGT---CGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 |||||||| | | | | ||| ||| ||| | || || || | ||| || Sbjct 251 CTCGTTGTTTGTGAGCTTCCCATTCCAATCGAAAAGGTCATGCGAGAGATCAATCTCTTC 310 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||| ||||| || || |||| |||| ||||||||| Sbjct 311 GACTGTCCAGAATGAGGCCTGGGCTCGTTTGTACAT 346 >seq10137 Length=11321 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| | || |||||| | | Sbjct 2928 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCTTGGAGGTCGAGTCGTCG 2869 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| ||||| ||||||| Sbjct 2868 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCGCCCGACCAG 2809 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||||||||| ||||| || || | |||||| ||| || |||||| Sbjct 2808 CAGCGTCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGGCGCACGCTCTCTGATTACAAC 2749 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| ||| || || || | ||||| ||| Sbjct 2748 ATCCAGAAGGAGAGC-ACCCTCCACCTTGTGCTCCGT 2713 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAA---CCATCACCGTCGACGTCGAGGCC 38300 ||||| || || || || ||| | ||||| || | | |||||| |||| || ||| | Sbjct 3218 ATGCAGATCTTTGTCAAGACGTTGACGGGTAAGAAGACTATCACCCTCGAGGTGGAGTCT 3159 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | |||| | || | || || | ||||| ||||| || ||| | || Sbjct 3158 TCGGACACGATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGA 3100 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| | || | ||| || || ||||| || || | |||||||| |||||| Sbjct 3099 CCAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGTCCGACTA 3040 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCAT-TTGGT 38452 |||||| || ||||| ||| ||||| ||| ||||| Sbjct 3039 CAACATTCAGAAGGAGAGC-ACGCTTCATCTTGGT 3006 >seq6477 Length=89905 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || |||||||| || || ||||| | || || ||| || | Sbjct 7441 ATGCAAATTTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCCTCG 7500 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| ||||| ||||| | || || Sbjct 7501 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGGATTCCGCCTGATCAG 7560 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| || || ||| |||| |||| ||| || ||| |||||||||| Sbjct 7561 CAGCGCCTGATCTTCGCTGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAAC 7620 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 7621 ATCCAGAAGGA 7631 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/193 (72%), Gaps = 12/193 (6%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| |||| || ||| | || Sbjct 6718 ATGCAGATCTTCGTCAAGACCCTCACGGG-AAGACTATCACCCTCGAGGTGGAGTCGTCC 6776 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | |||| | || | ||||| | ||||| ||||| || |||||| |||| Sbjct 6777 GACACTATCGATAACG-TCAAGGCGAAAATTCAGGACAAGGAGGGCAT-CCCGCCTGACC 6834 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | || ||| | || |||| ||||| ||| |||||||| Sbjct 6835 AGCAGCGTCTTATCTTTGCCGGC-------TCGAGGACGGTCGCACTCTCTCCGACTACA 6887 Query 38422 ACATCCAAAAGGA 38434 |||| || ||||| Sbjct 6888 ACATTCAGAAGGA 6900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500054615419520