Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq15036 134 2e-26 seq13619 116 5e-21 seq13613 100 4e-16 seq11160 86.0 8e-12 >seq15036 Length=18609 Score = 134 bits (148), Expect = 2e-26 Identities = 233/337 (69%), Gaps = 5/337 (1%) Strand=Plus/Minus Query 111903 GGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 111962 || || |||||| | || | || || |||| ||||| || |||| || |||| ||| Sbjct 11816 GGAACCAATGGTTACTCGAACGGCATCGTTCCTATGCTCCGTGTATACGACTCCACCGCG 11757 Query 111963 CGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCC 112018 || ||||| |||| | ||| | | | | || | |||| |||| || ||||| Sbjct 11756 CGGTATGTGGACCAGGGTGG-CAACAAACGTCCTGGTGCCTTCGCTATCTACCTCGAGCC 11698 Query 112019 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGC 112078 |||||| || || | | |||||| | || | || ||||| || | ||||||| Sbjct 11697 ATGGCATGCCGACGTGTTCGAGTTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGGT 11638 Query 112079 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || ||| || ||||||| ||| | ||||| || ||||| ||||||||| | || || Sbjct 11637 CCGCGCCCGTGACCTCTTCTACGCCTTGTGGATCCCCGATCTGTTCATGAAGCGCGTCGA 11578 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT 112198 || | ||||||| ||||| || || ||||| || ||||||| || ||| ||| | Sbjct 11577 GGCGGGTGGCAAATGGTCACTGTTCTGTCCCAACGAGGCACCTGGCCTCCACGAGGTTTG 11518 Query 112199 GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAG 112235 |||||| ||||| || ||||| ||| |||||||| Sbjct 11517 GGGTGACGAGTTCGAGGCCCTTTACGAGCAGTACGAG 11481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 111625 TCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACG 111684 ||||||| ||||| |||| |||||||||| || || || ||| || | || ||| Sbjct 12147 TCATGCGTGTCGCCGTCGGCATCCATGGGGCCGACATCGAACGCGTTCTGCAAACGTACA 12088 Query 111685 ACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACAC 111744 || |||||| || |||| ||| ||| | || |||||||||||||||||||| | Sbjct 12087 ACCTCATGTCCGAGCGTTACTTCACCCATGCATCGCCCACCCTCTTCAACGCTGGTACTC 12028 Query 111745 CAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCA 111804 | | || || ||| | || ||||| || | ||||| ||||| || | || | Sbjct 12027 CCAACCCTCAGATGAGCTCATGCTTCCTCGTTTGCATGAAGGACGATTCCATAGAGGGTA 11968 Query 111805 TTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGC 111864 | |||| || |||| || || ||| ||| ||| || ||||| ||||| | Sbjct 11967 TCTACGAGACGCTCAAGGACTGCGCCATGATCAGCAAGACAGCCGGTGGCATCGGTCTCA 11908 Query 111865 ACATCCAT 111872 |||||||| Sbjct 11907 ACATCCAT 11900 >seq13619 Length=8937 Score = 116 bits (128), Expect = 5e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 102085 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTA 102144 |||| ||||| || || || |||| | || || || | ||||| || || ||||| Sbjct 416 AGCACCTCTTCGATGCAATTGAAACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCAC 475 Query 102145 TGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 102201 | ||| | ||||| |||| | | || || ||||| || |||| || || Sbjct 476 TCCGCTGGATCTCGGATACGGAGTC---TACTTTCGCGGAGCGCCTTGTCGCCTTCGCCG 532 Query 102202 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 102260 || |||||||||||||||||||| ||||| |||| | || | |||||||||||||| Sbjct 533 CGGTCGAGGGTATCTTCTTCTCTGGGTCCTT-TGCGTCAATCTTCTGGCTCAAGAAGCGC 591 Query 102261 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || | ||||| |||||| ||||| |||||||| ||||| ||||||||||| Sbjct 592 GGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGACGAGGG 644 >seq13613 Length=18521 Score = 100 bits (110), Expect = 4e-16 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| || || ||| |||| | || ||||| | ||||| || || ||||| || Sbjct 17468 CTCTTCGACGCAATCGAAACCATACCCTGTATCAAGAAGAAGGCCGACTGGGCATTGCGT 17409 Query 102150 TGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 102206 ||| | | || | |||| ||| || ||||||||||| | || |||||| || Sbjct 17408 TGGATAGCGGACGACCAGTC-CGTG--TTCGCTGAGCGACTGGTGGCGTTTGCGGCCGTG 17352 Query 102207 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 102266 ||||| || ||||||||||| | || | | || | |||||||||||||| || ||| Sbjct 17351 GAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGGCTC 17292 Query 102267 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||| || || ||||| |||||||| || || || |||||||| Sbjct 17291 ATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGCGACGAGGG 17245 >seq11160 Length=6248 Score = 86.0 bits (94), Expect = 8e-12 Identities = 170/249 (68%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 112693 TCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGG 112752 |||| | || || || ||||| || || || ||||| || |||| || | || |||| Sbjct 4811 TCAACGTCCGCATCTTCGAGACGATATACCATGCCGCGCTGGAGGGTAGCTGTGAATTGG 4752 Query 112753 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTC 112812 | |||| || |||||||| || | | | || || || ||||| ||||| ||||| | Sbjct 4751 CTGAGGCTGCAGGTCCATACGACATGTGGGCTGGGTCACCGGCTTCCCAAGGTGTGCTCC 4692 Query 112813 AATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGACGCTCTCAAGGAAC 112872 | | || ||||||| | ||| ||| | ||| ||||||| | |||||| ||| Sbjct 4691 AGGTCGACATGTGGGGGGCTGATACCTCGGATCATTACGACTTCCAGTCTCTCAGGGAGA 4632 Query 112873 GCATCA-AGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCC 112931 | || | | | | || | | |||||| | |||| ||| | ||||| || |||||| Sbjct 4631 GGATAAGACGTGTCGGTT-TGCGTAACTCGATGTTGACGGCCCAGATGCCTACTGCCTCC 4573 Query 112932 ACCGCACAA 112940 ||||| ||| Sbjct 4572 ACCGCGCAA 4564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620595726330160