Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq10137 150 4e-31 seq6477 150 4e-31 seq6470 87.8 4e-12 >seq10137 Length=11321 Score = 150 bits (166), Expect = 4e-31 Identities = 159/208 (76%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||| || |||||||||| || || |||||||| || | |||||| | || || || | Sbjct 3298 CAAGGGGA-GAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCA 3356 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||||||| || |||||||| || || ||||| ||||| ||||| || ||||| || | Sbjct 3357 GCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGA 3416 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| || |||||||| || ||||| || ||||| | ||||| | Sbjct 3417 TCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGC 3476 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || ||||| | ||||| Sbjct 3477 CGGTCAAGGTCTTCACGAAGATCTGCAT 3504 Score = 131 bits (144), Expect = 4e-25 Identities = 156/211 (74%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 |||| ||||| ||| ||| || ||||| ||||| |||| || || | ||||| |||| Sbjct 3008 CAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGA 3067 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 |||||||||| |||||||| | || || ||||| || || || || || ||||| |||| Sbjct 3068 GCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAA 3127 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGG---TAACCGTCT 195109 | || ||||||||| || || ||||||||| ||||| || |||| || | ||| Sbjct 3128 TCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCT 3187 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || ||||| || || || || | ||||| Sbjct 3188 TACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||| ||| || || || |||||||| | || || | |||||| || Sbjct 2720 ACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCA 2779 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| || ||||| || || ||||| || Sbjct 2780 AGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGG 2839 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || ||||||||||| || || || | ||| | |||||| Sbjct 2840 ATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTC 2899 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 2900 CCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 >seq6477 Length=89905 Score = 150 bits (166), Expect = 4e-31 Identities = 159/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAG 194993 |||||||| |||||||| || || || || || |||| |||| || | ||||| || || Sbjct 7137 AGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAG-GTGCGACCATCCTCAAG 7079 Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 |||||| || |||||||| || || || ||||| ||||| || || || ||||||||||| Sbjct 7078 CTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAAT 7019 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 || ||| ||||| || || ||||||||| || || || || || | ||||||||| Sbjct 7018 CTTCGCCTTAACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCC 6959 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || ||||| | |||||| Sbjct 6958 GGTCAACGTCTTCACGAAGATTTGCAT 6932 Score = 143 bits (158), Expect = 6e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| ||||||||||| || ||||| || ||||| |||||||| | ||| || | ||||| Sbjct 7425 CAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATC 7366 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || | |||||| || || ||||| || ||||||||||| || |||||||| || ||||| Sbjct 7365 CTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTC 7306 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||| || ||| || || || ||||| |||||| ||||| || | || | ||| Sbjct 7305 CTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGT 7246 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || | || || ||||| | |||||| Sbjct 7245 TTTGCCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||||||||| || || ||||||||||| | || || | || || ||| Sbjct 6698 ACAAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGAGAGTGTGCGTCCGTCCTCG 6639 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| ||||||||||| | || || ||||| ||||| |||| Sbjct 6638 AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATGC 6593 >seq6470 Length=2367 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||| ||||| || || || ||||| ||| ||||| | ||||| ||| Sbjct 1027 ACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTACGGCCATCCTCG 1086 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || ||||| || || || || || || ||||| |||| Sbjct 1087 AGCTGCTTGCCGGCGAAAATCAGCCGCTGCTGATCAGGAGGGATGC 1132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109212889450601