Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq10137 109 4e-19 seq6477 104 2e-17 >seq10137 Length=11321 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||| | | ||| || ||||| || || ||||||||||| | || | || ||| Sbjct 3296 ACCAAGGGGAGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCC 3355 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || |||||||| | || | ||||||||||| Sbjct 3356 AGCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 3415 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | || || ||| || |||| ||| ||||| || Sbjct 3416 ATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTG 3475 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | |||||||| |||||||||||| Sbjct 3476 CCGGTCAAGGTCTTCACGAAGATCTGCATA 3505 Score = 105 bits (116), Expect = 4e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||||| || ||||||||||| ||||| || ||| | || |||| || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || | || |||||||| | || | ||||||||||| Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 3125 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGG---T 34948 ||||||| |||||| | |||| || | ||| || |||| ||| || | | Sbjct 3126 AATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTT 3185 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| | ||||| ||||||||||||||| Sbjct 3186 CTTACCCGTCAACGTCTTGACAAAGATCTGCATA 3219 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/201 (71%), Gaps = 8/201 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| || || || || | || |||| || ||||| || || Sbjct 2732 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGCTTGCCC 2791 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| |||| | ||||||||||| |||||| || Sbjct 2792 GCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTC 2851 Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| | ||| | ||| || || | ||| || || || |||||||| Sbjct 2852 AC--AT--TGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTGAG 2907 Query 34961 AGTCTTCACAAAGATCTGCAT 34981 ||||| || || |||||||| Sbjct 2908 GGTCTTGACGAAAATCTGCAT 2928 >seq6477 Length=89905 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||| | || | ||| || | ||||| || || ||||||||||| || |||||| Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||| ||| || || ||||| || || ||||| ||||| |||| Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTC 34930 | ||||||||||| ||||||| || || || | ||||| | ||| | ||| Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCAC--AT--TGTCGATGGTATCCGAAGACTC 7264 Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | || || ||||| || || || |||||||| || |||||||| Sbjct 7263 CACCTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 98.7 bits (108), Expect = 6e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||| | |||||| || ||||| ||||| ||||| || || | || | || |||| ||| Sbjct 7644 GTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTG 7585 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || || ||||| || |||| | |||||||||||| |||||| Sbjct 7584 CTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTT 7525 Query 34898 CTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGT 34957 || || | |||| || || |||||| || | || || || || ||||| Sbjct 7524 GGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGT 7465 Query 34958 GAGAGTCTTCACAAAGATCTGCAT 34981 ||| ||||||||||| || ||||| Sbjct 7464 GAGGGTCTTCACAAAAATTTGCAT 7441 Score = 96.9 bits (106), Expect = 2e-15 Identities = 148/209 (71%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| || ||||| ||||||||||| || | | | || |||| || ||||| Sbjct 7135 GTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTG 7076 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||| || || || || |||||||| | || | |||||||||||| |||||| Sbjct 7075 CTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTT 7016 Query 34898 CTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTC 34953 | || || | | ||||| | ||| | ||| || |||| || || || |||| Sbjct 7015 CGCCTTAAC----GTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTC 6960 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | |||||||| ||||| |||||| Sbjct 6959 CGGTCAACGTCTTCACGAAGATTTGCATA 6931 Score = 82.4 bits (90), Expect = 5e-11 Identities = 136/195 (70%), Gaps = 16/195 (8%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || || | || | || || ||| ||||||| Sbjct 6900 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGC-------CGGCAAAG 6848 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||| ||| ||||| Sbjct 6847 ATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTGAC---- 6792 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| || | ||| || |||| ||| || | | |||||||||| ||||| Sbjct 6791 GTTATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAG-TCTTCCCGTGAGGGTCTT 6733 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 6732 GACGAAGATCTGCAT 6718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324558810809784