Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6477 118 8e-22 seq10137 95.1 9e-15 >seq6477 Length=89905 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || ||||| ||| || ||||| |||||||| || || | ||| Sbjct 7430 AGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAAAGGGTACGA 7371 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || ||||| ||||| || ||||| || | |||| ||||||| Sbjct 7370 CCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCC 7311 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | || || | ||||||||||| || Sbjct 7310 TTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACCTCCAATGTG 7251 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || || | || || || ||||||||||| Sbjct 7250 ATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || || | || |||| ||||||||| Sbjct 7643 TGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGC 7584 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || ||||| ||||| ||||| | |||| ||||||||||| |||||| Sbjct 7583 TTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTTG 7524 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || | ||| ||||||| ||| ||||| || ||||| Sbjct 7523 GCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTG 7464 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || |||||||| ||||| Sbjct 7463 AGGGTCTTCACAAAAATTTGCAT 7441 >seq10137 Length=11321 Score = 95.1 bits (104), Expect = 9e-15 Identities = 150/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 48558 ACCAA-ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||| ||| ||||||||||| || ||||| ||||| || || || | ||| | || || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 | ||||||||| || || |||| ||||| || || | ||| | ||||||||||| Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 3125 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCG---TAATCGT 48733 |||||| || || | | | || || | ||||||||| | | || || | Sbjct 3126 AATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTT 3185 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || || ||||| |||||||| Sbjct 3186 CTTACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||||||||| || | || | || || | |||| Sbjct 2726 TGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGC 2785 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || || || ||||| || || | |||| ||||||||||| ||||| Sbjct 2786 TTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTC 2845 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || |||| ||| ||||||| || ||||| || ||||| Sbjct 2846 GCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTG 2905 Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767 | || || || |||||||||||| Sbjct 2906 AGGGTCTTGACGAAAATCTGCATC 2929 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| | || ||| ||| || || |||||||| || || ||| | || |||| ||| Sbjct 3296 ACCAAGGGGAGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCC 3355 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | ||||||||||||||| || || ||||| || || | || | |||||||||||| Sbjct 3356 AGCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 3415 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||||||||| | || || || || Sbjct 3416 ATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTG 3475 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| || || || || |||||||| Sbjct 3476 CCGGTCAAGGTCTTCACGAAGATCTGCAT 3504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380849839476669