Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq13619 242 7e-59 seq15036 203 6e-47 seq13613 176 8e-39 >seq13619 Length=8937 Score = 242 bits (268), Expect = 7e-59 Identities = 390/558 (70%), Gaps = 7/558 (1%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| || ||||| |||||| || ||||| || ||||||| |||| |||| Sbjct 673 AGAGCAAGCATGCGAAGTCGGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 614 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | |||||| ||||| | || | || ||||||||||| |||| ||| || || |||| Sbjct 613 ACGTGAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACCCAG 554 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||| ||| || | ||| |||||| || | | Sbjct 553 AGAAGAAGATACCCTCGACCGCGGCGAAGGCGACAAGGCGCTCCGCGAAAGTAGACTCCG 494 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 | || ||||||||| || |||||||| ||||||||||||||||| || || || || | Sbjct 493 TATCCGAGATCCAGCGGAGTGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTTCAA 434 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCT--GCGTCCGCAACATAGGTAGTGAGCAGCTT 48420 | || |||||| | || ||| | || | ||| | ||||| || || Sbjct 433 TTGCATCGAAGAGGTGCT--CACGCTGCTTGGGGTCTTTGATGTAGGTGTCGATGAGGAG 376 Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480 | ||| | || ||||| | ||||| || ||||||||| ||||||||| | ||| Sbjct 375 GGAGTAGGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGC 316 Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATC 48540 |||| |||| || || ||||||| | || | || ||||| || || || ||||| Sbjct 315 CTCAGCGGCCTGGACCTCGTTGGAGAAACGTTCGACGAGGTTCTCGTTCACAATACCATC 256 Query 48541 TGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC 48600 ||| || || |||||||| |||||||| | ||| |||||||| | || | ||||| Sbjct 255 TGAGGCGGCGAAGAAGGCGAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGAGACG 196 Query 48601 ATT---CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 || ||| | || | || ||| || |||| || ||| | ||||| ||||| || Sbjct 195 GTTGTGCCAATCGTGGAGATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAAAAGGAAGC 136 Query 48658 GAGTGCTTTTTTGTACAT 48675 || || |||||||| Sbjct 135 CTCGGCCTTCTTGTACAT 118 >seq15036 Length=18609 Score = 203 bits (224), Expect = 6e-47 Identities = 668/1021 (65%), Gaps = 52/1021 (5%) Strand=Plus/Plus Query 212586 GTGCGTAGATAGTACATGCCGGTCTTTAGGCCCTTGCCCCAGCCGTGCATGTGCATTGCT 212645 ||||| || ||||||||||| ||||| || ||||| |||||||| | ||||| ||| Sbjct 10337 GTGCGGAGGTAGTACATGCCCGTCTTCAGACCCTTCTTCCAGCCGTAGAAATGCAT-GCT 10395 Query 212646 GTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGAC 212705 | |||||| || |||| | | || || || | ||| || ||| Sbjct 10396 --------CGTCAGCTGTCCGTT--GGTCGGCG-CTTG---CAAGTGCACGTTGAGAGAC 10441 Query 212706 TGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAG 212765 || |||| ||||||| | | | ||| ||||||| ||| | || | |||| ||| Sbjct 10442 TGCGACTGGCAGATGAATGCGCCGCGGTCCGCGGCCAGGTCGAGGACCTTCTTCTGCGAG 10501 Query 212766 AGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGC 212825 | |||||| || |||||| | || | || | |||||| |||| | | |||||||||| Sbjct 10502 ATCTCCCATACAGTCTTGTAAATCGCCTTCACGTCCTCGGGGATGATGTCGATGTTCTGC 10561 Query 212826 ACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTG 212882 |||||||| ||| ||| ||| | | |||||| |||||||||||||| | Sbjct 10562 ACAGACCCGTTGTTGGCGATGATCATGTTCTT---CATGTCGTCGTTCCAGAGGCCGA-G 10617 Query 212883 GTCTCCAGGCACTTG-ACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCT 212941 || || || | | | || |||| || |||||||| || || | |||||| | Sbjct 10618 CTCGACAAGCTCACGGAGGAGCCAAGGGCACACGATCTGGAACTCGCCCGCGAGCACACG 10677 Query 212942 CCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGC 213001 | || | ||| ||||||||||||| || |||||||| ||||||||||| | Sbjct 10678 ACGGGTATAGATGTTGCTGGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGAATCTGCGA 10737 Query 213002 AGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGA- 213060 ||| |||||| |||||||| || || ||||| |||||||| ||||||| | ||| Sbjct 10738 CGTGGAGGCTGTAGGCATGGGCGCGACGAGGAGTGAGTTCCTCAAGCCGTGCTGGGCGAC 10797 Query 213061 TGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCC 213120 || || ||| |||||||||| | |||||| | ||| || Sbjct 10798 CTTGGACTTGAGGCT-AGCCCAGTCCC---------AGAGGTCCGTTGGAGTAACGCCCC 10847 Query 213121 ACATGTCAAACTGCAAGATGCCTTTGCTCA-CGGGGCTGCCCTGGTAAGAGGAGTAGGGG 213179 ||| ||| ||||| || || | ||| | | || || |||| ||| | |||||| Sbjct 10848 ACAGGTCGTACTGC-AGCTGGCCTTGAGAAGCAGGACTACCCTCGTACGTTTCGTAGGGA 10906 Query 213180 CCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAAT 213239 || | ||| ||||| |||||| || | | || || | |||||| |||||| | Sbjct 10907 CCTTCAGCCTGGGCCATCTCGCAACTTGCTTCAACAGCGGCATGGTAGATCGTTTCAGAG 10966 Query 213240 ATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAAC 213299 || | |||||||||| ||||| ||| || ||||| | ||| || Sbjct 10967 ATTTGTAGGTTGAGCTTCCGCGCCTCGACGGAGTCAAACGGCAT-ACGGAGCGCCATAAA 11025 Query 213300 A-CATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGA 213358 | |||| || || ||||| || |||||||||||||| | ||| | || ||| || || Sbjct 11026 AGCATCCGCAAGACCCTGCACGCCGATGCCGATGGGACGGTGGCGCATGTTCGA-GCGGC 11084 Query 213359 GCACTCCTCCAA-GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCA 213417 || || | || |||||| |||||| ||||||||| |||||||||| || | | | Sbjct 11085 GCGCTTCGGGAATGGGGTAGTAGTTGCCGTCGATGATGCGGTTGAGGTTGAAGGCGACGA 11144 Query 213418 CTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACT 213477 | || | ||| | ||| | | ||||| ||| || |||| | || Sbjct 11145 CCTTCGCAACAGCGTGCAGCTTC------TTGAAGTTGTACTTGCCATCCTCGATGAAGG 11198 Query 213478 CAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGC---CACCTCCTGAGAGTCTGTGTACT 213534 || ||||| ||| || || ||||| || || | | || ||||| | |||| Sbjct 11199 AGGGAAGGGCAATGGAAGCAAGATTGCAGACAGCAGTCTCATCGGGAGAG---GAATACT 11255 Query 213535 CCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACT 213594 | |||||||| ||||| |||||| | |||||| || |||||||| ||||| |||| Sbjct 11256 CGATGATCTCTGTGCATAGGTTGGATGACTTGATGGTACCGAGGTTCTGCTGGTTCGACT 11315 Query 213595 T 213595 | Sbjct 11316 T 11316 >seq13613 Length=18521 Score = 176 bits (194), Expect = 8e-39 Identities = 374/558 (67%), Gaps = 3/558 (1%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || ||||| | |||| ||| ||||| || |||||| |||| ||||| || Sbjct 17223 GCAAGCGAAGTCGGTATGCATGCCCTCGTCGCGCGATATGAGCTCGTTTGAGAACGTCAG 17282 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||||| ||| | || ||||||||||| || | || ||| | ||||||||||| Sbjct 17283 GCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAGAA 17342 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||||||||||| ||||| ||||| || | ||| |||| | | | ||| | Sbjct 17343 TATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCCGC 17402 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||| | |||||||| |||||||||||||| || || || || || || || Sbjct 17403 TATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATTGCGTC 17462 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 |||||| | | || | | || | ||| ||| || || | ||| | Sbjct 17463 GAAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTATCGATGAGGAGAGAGTAGGT 17522 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 ||| ||||| || || || || |||||| || ||||| ||| | |||||| | Sbjct 17523 CTCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAAGCATCGTGCCTCAGCGGC 17582 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 ||| || || | || || | ||| | ||||||||| ||||| || || ||||| || || Sbjct 17583 CTGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTCTGAGGCGGC 17642 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG---AGCATTCCA 48606 |||||||| || |||| ||||| || |||||||||| ||||| | ||||| Sbjct 17643 GAAGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGTTTGTGAGCTTCCCGTTCCA 17702 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | | ||| | || || | ||||| || |||||||| ||||| | || Sbjct 17703 GTCGAAAAGGTCATGCGAAAGATCAATCTCTTCGACTGTCCAGAATGACGCCTGGGCCCG 17762 Query 48667 TTTGTACATGCCCCATAT 48684 ||||||||| |||||| Sbjct 17763 TTTGTACATTTGCCATAT 17780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931312690443520