Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq13619 158 2e-33 seq13613 158 2e-33 seq15036 102 2e-16 >seq13619 Length=8937 Score = 158 bits (174), Expect = 2e-33 Identities = 434/658 (66%), Gaps = 28/658 (4%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | || |||||||| || ||||| ||||| Sbjct 109 ATTTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTTTGGACCGCGGAGGAGATGGATCTT 168 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGC---ATTT----TCT 25589 ||||||| | ||| ||| || | ||| ||||| ||| | || ||| Sbjct 169 TCCAAGGATCTCCACGATTGGCACAACCGTCTCAACGACGATGAGCGCCACTTCATCTCT 228 Query 25590 CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA 25649 || || | | || ||||| || ||||| |||||||| ||||||||||| || ||| Sbjct 229 CATGTCC----TCGCCTTCTTCGCCGCCTCAGATGGTATTGTGAACGAGAACCTCGTCGA 284 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | ||| ||| || || ||| || |||||| || |||||||| |||||||| Sbjct 285 ACGTTTCTCCAACGAGGTCCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCAT 344 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGA 25766 || || || | ||||| || || || || || || || ||||| | ||| Sbjct 345 GATGGAGAACATCCACTCCGAAACCTACTCC---CTCCTCATCGACACCTACATCAAAGA 401 Query 25767 CGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAA 25826 | | || | || | || || | ||| || || ||| ||| ||||||||| ||| Sbjct 402 CCCCAAGCAGCGTGAGCACCTCTTCGATGCAATTGAAACCATCCCCTGCATCAAGAAGAA 461 Query 25827 GGCGCGGTGGGCCATGAAGTGGATCAAC-AGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 ||| ||||| | |||||| | | ||| |||| || | ||||| || | Sbjct 462 GGCCGACTGGGCACTCCGCTGGATCTCGGATACGGAGT-CTACTTTCGCGGAGCGCCTTG 520 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | ||||| || || || ||||| ||||| ||| || || |||||| | |||||||||| Sbjct 521 TCGCCTTCGCCGCGGTCGAGGGTATCTTCTTCTCTGGGTCCTTTGCGTCAATCTTCTGGC 580 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 ||||| || || |||||||| || || || |||||||||||| | |||| Sbjct 581 TCAAGAAGCGCGGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGACG 640 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTT 26065 ||||| | |||| || || || ||| |||||| || |||| ||| | | | Sbjct 641 AGGGTATGCACACCGACTTCGCATGCTTGCTCTTCA---GCCA---TCTCAAGAGGCGGC 694 Query 26066 CTCA---AGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTT 26120 |||| || ||| | || ||||||| ||||| |||| ||||||| ||||||| Sbjct 695 CTCACTTCGACACCATTCGCAAGATCATCACGGAGGCCGTGGCGATCGAGCAGGAGTT 752 >seq13613 Length=18521 Score = 158 bits (174), Expect = 2e-33 Identities = 382/567 (67%), Gaps = 11/567 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | |||||||| ||| || ||| |||||| | ||||||||||||||| Sbjct 17780 ATATGGCAAATGTACAAACGGGCCCAGGCGTCATTCTGGACAGTCGAAGAGATTGATCTT 17721 Query 25537 GCCAAGGACATGGACGGCTGGTACGCT---CTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 | | ||| | || |||| ||| || | || |||||| ||| || ||| Sbjct 17720 TCGCATGACCTTTTCGACTGGAACGGGAAGCTCACAAACAACGAGCGGCACTTCCTCTCT 17661 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || ||| | || ||||| || ||||| || || || || |||||||||||| |||| | Sbjct 17660 TATGTGCTCGCCTTCTTCGCCGCCTCAGACGGCATTGTCAACGAGAATCTGGTCGAGCGG 17601 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 || | | || || ||| || ||||| || || ||||| || ||||| ||| Sbjct 17600 TTTTCTAACGAGGTCCAGGCCGCTGAGGCACGATGCTTTTACGGCTTTCAGATCATGATC 17541 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTCGC 25772 ||||| || ||||| ||| || | || | ||| || || || | ||| || Sbjct 17540 GAAAACGTTCACTCGGAGACCTACTCTCTCCTCATCGAT-ACTTATATCAGAGATCCCGA 17482 Query 25773 CGAGAGAGATCGGC-TGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 ||| | || | | | || | || ||||| ||||||| | ||||||| |||||| Sbjct 17481 CGAACG-GACCTTCCTCTTCGACGCAATCGAAACCATACCCTGTATCAAGAAGAAGGCCG 17423 Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGT-TTGGC-GAGCGGCTGGTAGC 25889 ||||| || ||||| | | | | || | | ||| || || ||||| ||||| || Sbjct 17422 ACTGGGCATTGCGTTGGAT-AGCGGAC-GACCAGTCCGTGTTCGCTGAGCGACTGGTGGC 17365 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||||| || ||||||||||| || ||| || | ||||| |||||||||||||||| Sbjct 17364 GTTTGCGGCCGTGGAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTCTGGCTCAA 17305 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || ||| ||||||||| ||| || || ||||||||||| | |||||||| Sbjct 17304 GAAGCGTGGGCTCATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGCGACGAGGG 17245 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCT 26036 | || | || || || ||||| || Sbjct 17244 CATGCATACCGACTTCGCTTGCCTCCT 17218 >seq15036 Length=18609 Score = 102 bits (112), Expect = 2e-16 Identities = 258/385 (67%), Gaps = 7/385 (2%) Strand=Plus/Plus Query 221819 TTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878 |||||||| |||||||||||||| || || || || ||||| | ||||| | |||| || Sbjct 11371 TTGGCAGCATCCTTGTAGAGCATGAAAGGGCCCCCGGTCTCAATCTGAGACTCCAGGATA 11430 Query 221879 TTGTCCCAGAGTTCTCTGGCGCTC-ACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATA 221937 || ||| || | |||| ||| | ||| || | |||||| || | | Sbjct 11431 GCGTACCAAAGCT-TCTGAGCCTCGATGGTCTTCCGTGCACGACCCTCACGCTCGTACTG 11489 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 | || || || || | | |||| ||||| | |||||| ||||| || | | Sbjct 11490 CTCG-TAAAGGGCCT--CGAACTCGTCACCCCAAACCTCGTGGAGGCCAGGTGCCTCGTT 11546 Query 221998 GGGACACATCAGACTCCAGT-GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGA 222056 |||||| | ||| ||| | || | || ||| | || |||||| || || |||| Sbjct 11547 GGGACAGAACAGTGACCATTTGCCACCCGCCTC-GACGCGCTTCATGAACAGATCGGGGA 11605 Query 222057 TCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCA 222116 |||||| || | ||||| || | || || ||||||| ||||| ||| || | | Sbjct 11606 TCCACAAGGCGTAGAAGAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGA 11665 Query 222117 GATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGG 222176 | || | ||||| || | ||| || ||||| ||||| || |||| || | || || | Sbjct 11666 GGTCGATGAACTCGAACACGTCGGCATGCCATGGCTCGAGGTAGATAGCGAAGGCACCAG 11725 Query 222177 GTCGCTTGTTGCCACCCTGATCCAC 222201 | || |||||||||||||| ||||| Sbjct 11726 GACGTTTGTTGCCACCCTGGTCCAC 11750 Score = 95.1 bits (104), Expect = 2e-14 Identities = 201/292 (69%), Gaps = 6/292 (2%) Strand=Plus/Plus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAG-TTCGGCCTGGGCGCAAGACTGCGT 221418 ||||| || ||||||| ||||||||||| | ||| | |||| ||||| ||| | Sbjct 10880 GGACTACCCTCGTACGTTTCGTAGGGACC-TTCAGCCTGGGCCATCTCGCAA-CTTGCTT 10937 Query 221419 C-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAG 221477 | | || || |||||||| || ||| |||| |||||| || |||||| | Sbjct 10938 CAACAGCGGCATGGTAGATCGTTTCAGAGATTTGTAGGTTGAGCTTCCGCGCCTCGACGG 10997 Query 221478 AAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 | || |||||||| ||| | ||| | || || || ||||| || ||||| |||| Sbjct 10998 AGTCAAACGGCATACGGAGCGCCATAAAAGCATCCGCAAGACCCTGCACGCCGATGCCGA 11057 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 |||| | ||| | | |||| | |||||| |||||| || | ||| || ||||| ||||| Sbjct 11058 TGGGACGGTGGCGCATGTTCG-AGCGGCGCGCTTCGGGAATGGGGTAGTAGTTGCCGTCG 11116 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648 || | ||||||||| | | || ||| || | || || |||||||| Sbjct 11117 ATGATGCGGTTGAGGTTGAAGGCGACGACCTTCGCAACAGCGTGCAGCTTCT 11168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928625325584320