Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq15036 131 2e-25 seq5406 87.8 2e-12 >seq15036 Length=18609 Score = 131 bits (144), Expect = 2e-25 Identities = 299/444 (67%), Gaps = 7/444 (2%) Strand=Plus/Minus Query 75502 ggggACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561 ||| || |||||| | || | || || |||| ||||| || |||| || |||| || Sbjct 11817 GGGAACCAATGGTTACTCGAACGGCATCGTTCCTATGCTCCGTGTATACGACTCCACCGC 11758 Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGT-CCATCGCGGTCTACTTGGAAC 75617 ||| ||||| | || | | ||| | | | ||| || |||| ||||| | || | Sbjct 11757 GCGGTATGTGGACCAGG-GTGGCAACAAACGTCCTGGTGCCTTCGCTATCTACCTCGAGC 11699 Query 75618 CATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGG 75677 ||||||||||||| | | |||||| | || | || ||||| || | || |||| Sbjct 11698 CATGGCATGCCGACGTGTTCGAGTTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGG 11639 Query 75678 CTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || | || ||||| | || ||||||| || || || ||||||||||| || | Sbjct 11638 TCCGCGCCCGTGACCTCTTCTACGCCTTGTGGATCCCCGATCTGTTCATGAAGCGCGTCG 11579 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 ||| |||||| ||||||| || |||||||| || ||||||| || ||| ||| | Sbjct 11578 AGGCGGGTGGCAAATGGTCACTGTTCTGTCCCAACGAGGCACCTGGCCTCCACGAGGTTT 11519 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 |||||| ||||| || ||||| ||| |||| || |||||| | || || Sbjct 11518 GGGGTGACGAGTTCGAGGCCCTTTACGAGCAGTACGAGCGTGAGGGTCGTGCACGGAAGA 11459 Query 75858 CTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | | || | | || | ||||| | ||||| || | || |||| ||||| || Sbjct 11458 CCAT-CGAGGCTCAGAAGCTTTGGTACGCTATCCTGGAGTCTCAGATTGAGACCGGGGGC 11400 Query 75917 CCATATATGCTTTACAAGGATGCT 75940 || | ||||| |||||||||||| Sbjct 11399 CCTTTCATGCTCTACAAGGATGCT 11376 Score = 82.4 bits (90), Expect = 9e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 75225 TCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACG 75284 ||||||| ||||| |||||||||| |||| ||||| || || || | || ||| Sbjct 12147 TCATGCGTGTCGCCGTCGGCATCCATGGGGCCGACATCGAACGCGTTCTGCAAACGTACA 12088 Query 75285 ACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACAC 75344 || |||||| | || |||| || ||| | || ||||||||||| |||||||| | Sbjct 12087 ACCTCATGTCCGAGCGTTACTTCACCCATGCATCGCCCACCCTCTTCAACGCTGGTACTC 12028 Query 75345 CAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTA 75404 | | || |||||| | |||||||| | || ||||| || || || | |||| Sbjct 12027 CCAACCCTCAGATGAGCTCATGCTTCCTCGTTTGCATGAAGGACGATTCCATAGAGGGTA 11968 Query 75405 TCTATGGAACTCTTACGGAGTGTGC 75429 |||| | || || | ||| || || Sbjct 11967 TCTACGAGACGCTCAAGGACTGCGC 11943 >seq5406 Length=1760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 176/256 (69%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 13605 AGTGTACTCTCATTGTCACAGAGGGTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCT 13664 ||||||| ||||| |||| |||||||| || || || | |||||| | || || || Sbjct 614 AGTGTACGCTCATCCTCACTGAGGGTGACTCCGCCAAGGCGCTCGCGATCGCTGGGCTGG 673 Query 13665 CTGTCGTTGGTCGTGATCAC-TACGGTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTT 13723 ||| || |||||||| ||| ||||| |||||||| |||||||| ||| || || Sbjct 674 GTGTGGTCGGTCGTGA-CACGTACGGCGTGTTCCCGCTTCGCGGAAAACTGCTCAACGTC 732 Query 13724 CGGGACGCTTCGGTGGCACAGCTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATC 13783 || ||||| | | ||| ||| || ||||| || | | ||||||||||| Sbjct 733 CGCGACGCGAAGCACGACCAGATCATGAAGAATGAGGAGATCCAGAACATCAAGAAGATC 792 Query 13784 CTTGGTCTTCAACAAGGAAAAGACTACCAAGAT-GTTTCTGAACTTCGCTATGGTCGTCT 13842 || || || || || | |||||| || || || | || || ||||||||||| Sbjct 793 CTAGGGCTGCAGCACA-ACAAGACTTACACGAGCGTCGACGGGCTGCGGTATGGTCGTCT 851 Query 13843 TATGATTATGACAGAT 13858 ||| | ||||| ||| Sbjct 852 CATGTTGATGACGGAT 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596428638060640