Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq13619 136 5e-26 seq13655 132 6e-25 seq10256 125 9e-23 seq15036 123 3e-22 seq13613 122 1e-21 seq13643 102 1e-15 seq17136 87.8 2e-11 seq17126 87.8 2e-11 seq9834 87.8 2e-11 >seq13619 Length=8937 Score = 136 bits (150), Expect = 5e-26 Identities = 149/196 (76%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| | ||| || |||||| |||||| ||||||||||| |||| |||||||||| Sbjct 1014 GCCTTCGAGTAGTCCGAGACGCGCTTCTCGAAGAAGTTGGTCTTTCCCTGGAGCGAGATC 955 Query 868751 AACTCCATCCACGGGAACGGGTTGGG--CGTCTTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||| | ||| ||||||| || | ||||||||| || || |||| Sbjct 954 ATGTCCATGAAGTCGAAGGGGTTGGTGACGCC--GTAGTGCTTGTCATCGCCAAGCGCGA 897 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||| || || |||||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct 896 CGAGTAGACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTGGAGTTCATGCCGA 837 Query 868869 TGAGCGCCACCGGCAG 868884 ||||||| || || || Sbjct 836 TGAGCGCAACGGGAAG 821 Score = 122 bits (134), Expect = 1e-21 Identities = 179/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| | |||| || | ||| Sbjct 362 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGGCCTGG 303 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||| || || | ||||||||| ||| || || || ||||||||| Sbjct 302 ACCTCGTTGGAGAAACGTTCGACGAGGTTCTCGTTCACAATACCATCTGAGGCGGCGAAG 243 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CG--ACACCCAGTGG 869809 || || ||||| || ||| ||||||||||| |||||| |||| || ||| | | Sbjct 242 AAGGCGAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGAGACGGTTGTGCCAATCG 183 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | || |||| |||||| |||||||| | || ||||||||||| ||| Sbjct 182 TGGAGATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAAAAGGAAGCCTCGGCCTTCTTG 123 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 122 TACATTTGCCA 112 Score = 105 bits (116), Expect = 8e-17 Identities = 202/292 (69%), Gaps = 17/292 (6%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | ||||| || | ||| |||||||| | ||||||||| Sbjct 645 ACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGTGAGACCGGGCATCAAGCCGCGCTT 586 Query 869239 CTTGAGCCAAAAGA-TGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAA 869297 ||||||||| |||| || |||| || || ||||| ||||| |||||||| ||||| | Sbjct 585 CTTGAGCCAGAAGATTGACGCA-AAGGACCCAGAGAAGAAGATACCCTCGACCGCGGCGA 527 Query 869298 AGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCG 869354 || ||| || ||||| || || || || |||| | | |||||| | | Sbjct 526 AGGCGACAAGGCGCTCCGCGAAAGT----AG--ACTCCGTATCCGAGATCCAGCGGAGTG 473 Query 869355 CCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC-- 869412 ||||||||||||| ||| | | | || | || || || || |||||||| || Sbjct 472 CCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTTCAATTGCATCGAAGAGGTGCTCAC 413 Query 869413 -CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || | | ||||| |||| ||||||||||| ||||| || ||||| || Sbjct 412 GCTGCTTG---GGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTTTC 364 >seq13655 Length=683 Score = 132 bits (146), Expect = 6e-25 Identities = 144/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| | ||| || |||||| |||||| ||||||||||| |||| |||||||||| Sbjct 190 GCCTTCGAGTAGTCCGAGACGCGCTTCTCGAAGAAGTTGGTCTTTCCCTGGAGCGAGATC 131 Query 868751 AACTCCATCCACGGGAACGGGTTGGG--CGTCTTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||| | ||| ||||||| || | ||||||||| || || |||| Sbjct 130 ATGTCCATGAAGTCGAAGGGGTTGGTGACGCC--GTAGTGCTTGTCATCGCCAAGCGCGA 73 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||| || || |||||||| ||||||||||| ||||||||||| | ||||||||||| Sbjct 72 CGAGTAGACGATCGGCGACGAACTCGATGTATTGGCACATGAGCTTRGAGTTCATGCCGA 13 Query 868869 TGAGCGCCAC 868878 ||||||| || Sbjct 12 TGAGCGCRAC 3 >seq10256 Length=6682 Score = 125 bits (138), Expect = 9e-23 Identities = 114/141 (81%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG-CCGTG 19111 ||||||||||| ||||| |||||| ||||||||||| || ||| |||||||| ||||| Sbjct 6571 ATCGGCGGCACCGTGACCTGCGTGATCCGCAACGTGCCCGCGGGCGTCGGCGAGCCCGTG 6512 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 || |||||| ||||||| |||||| ||||| ||||| |||||||| || || |||| Sbjct 6511 -TTCGACAAGCTCGAGGCGAAGCTCGCGCACGCGATGCTCTCGATCCCCGCGACGAAGGC 6453 Query 19172 ATTCGAGATTGGCAGCGGGTT 19192 |||||||| ||| ||| || Sbjct 6452 GTTCGAGATCGGCTCCGGCTT 6432 >seq15036 Length=18609 Score = 123 bits (136), Expect = 3e-22 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1628382 CTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGC 1628441 |||||| ||||| || |||||| ||||| || || ||||| | |||||| | | | | Sbjct 11523 CTCGTGGAGGCCAGGTGCCTCGTTGGGACAGAACAGTGACCATTTGCCACCCGCCTCGAC 11582 Query 1628442 GCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTC 1628501 ||| ||| || || || |||||| ||||| |||||||| || || ||| ||| Sbjct 11583 GCGCTTCATGAACAGATCGGGGATCCACAAGGCGTAGAAGAGGTCACGGGCGCGGACCTC 11642 Query 1628502 CTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTC 1628561 |||||||||||||||||| |||||||| | |||| | |||||| ||||| ||||| Sbjct 11643 CTCCTTGCCGTGGTTCTTGCGGAGGTCGATGAACTCGAACACGTCGGCATGCCATGGCTC 11702 Query 1628562 CAGGTAGCAGGCAAAGGCGCC 1628582 |||||| || ||||| || Sbjct 11703 GAGGTAGATAGCGAAGGCACC 11723 Score = 116 bits (128), Expect = 5e-20 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 1627348 AAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCG 1627407 || ||||||| |||||| || || || ||||||||| ||||| | |||| | ||| Sbjct 10658 AACTCGCCCGCGAGCACACGACGGGTATAGATGTTGCTGGTGTAGGGCTCGAAGCATTCG 10717 Query 1627408 GTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGAGTTG 1627467 |||||||||| ||||||||||| | ||| || |||||| |||| |||||||| ||||| Sbjct 10718 TTGTTGCCCAGAATCTGCGACGTGGAGGCTGTAGGCATGGGCGCGACGAGGAGTGAGTTC 10777 Query 1627468 CGCAGGCCGTGCTG 1627481 | || ||||||||| Sbjct 10778 CTCAAGCCGTGCTG 10791 Score = 109 bits (120), Expect = 7e-18 Identities = 146/202 (72%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 1627789 TGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACGGC 1627848 ||||||| ||| ||| |||| ||||||| |||||| || || || ||||| Sbjct 10949 TGGTAGATCGTTTCAGAGATTTGTAGGTTGAGCTTCCGCGCCTCGACGGAGTCAAACGGC 11008 Query 1627849 A---GGTCCATCATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGG 1627905 | || | ||| ||| | || || || ||||||||||||| ||| || || ||| Sbjct 11009 ATACGGAGCGCCAT---AAAAGCATCCGCAAGACCCTGCACGCCGATGCCGATGGGACGG 11065 Query 1627906 TGGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGG 1627965 ||||||| ||||||| |||| || ||||| | ||||||| |||| |||||| | |||| Sbjct 11066 TGGCGCATGTTCGAGCGGCGCGCTTCGGGAATGGGGTAGTAGTTGCCGTCGATGATGCGG 11125 Query 1627966 TTGAGGTTGCCCACCACGACCT 1627987 ||||||||| | ||||||| Sbjct 11126 TTGAGGTTGAAGGCGACGACCT 11147 Score = 102 bits (112), Expect = 1e-15 Identities = 183/269 (68%), Gaps = 15/269 (6%) Strand=Plus/Plus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 |||||||| ||||| | |||| ||| | ||||| | |||||||| |||||||| ||| Sbjct 11913 CCGATGCCACCGGCTGTCTTGCTGATCATGGCGCAGTCCTTGAGCGTCTCGTAGATACCC 11972 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 || || || ||| |||||||| ||||| ||||| || | || |||| | || Sbjct 11973 TCTATGGAATCGTCCTTCATGCAAACGAGGAAGCATGAGCTCATCTGAGGGTTGGGAGTA 12032 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 || ||||||||||| ||||||| || |||||| | || |||||| || ||| Sbjct 12033 CCAGCGTTGAAGAGGGTGGGCGATGCATGGGTGAAGTAACGCTCGGACATGAGGTTGTAC 12092 Query 1630363 GTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCG 1630422 || || ||||| || | |||||| ||||| | ||||| |||| Sbjct 12093 GTTTGCAGAACGCG------------TTCGATGTCGGC---CCCATGGATGCCGACGGCG 12137 Query 1630423 ACGCGCATGAGCATGTACTGGGGCCGCTC 1630451 || |||||||| | | || |||||||| Sbjct 12138 ACACGCATGAGGAGATGTTGTGGCCGCTC 12166 >seq13613 Length=18521 Score = 122 bits (134), Expect = 1e-21 Identities = 180/250 (72%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 |||||||||||||| || |||||||||||||| ||||||| | |||| || ||||| Sbjct 17281 AGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAG 17340 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 || |||||||| ||||| ||||| | | || ||||| || || | || | ||| Sbjct 17341 AATATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCC 17400 Query 869336 TTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATG 869395 | | ||||| || |||||||||||||| ||| | | | || | || ||||| Sbjct 17401 --GCT-ATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATT 17457 Query 869396 GCGCGAAAGAGG-TGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGA 869454 ||| |||||| ||||| |||| | || || ||| ||| || ||||| ||||| || Sbjct 17458 GCGTCGAAGAGGAAGGTCC-GTTCGTCGGGATCTCTGATATAAGTATCGATGAGGAGAGA 17516 Query 869455 ATAGGTCTCC 869464 ||||||||| Sbjct 17517 GTAGGTCTCC 17526 Score = 118 bits (130), Expect = 1e-20 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 || ||| ||||| || |||||| ||| || |||||| ||||||||||| ||||| || Sbjct 16869 GAAGTGTGCCTTCGCATACTCGGACACCCGTTTCTCGAAGAAGTTGGTCTTCCCCTCAAG 16928 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 ||| |||| ||||| | |||||||| | ||||||||||| || |||||| Sbjct 16929 CGAAATCATGTCCATGAAGTCAAACGGGTTATTTGAGTTGTAGTGCTTCTCATTTCCGAG 16988 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACAT-GAGGCCGGCGTTCA 868862 | | ||||| | ||| || |||||||||||||| |||||||| ||| || | || | Sbjct 16989 AGCAACAAGCAGCCTGTCCGCTACAAACTCGATGTATTGGCACATCGAGTCC-GAATTGA 17047 Query 868863 TGCCGATGAGCGCCACCGGCAG 868884 |||||||||| ||| || || Sbjct 17048 GACCGATGAGCGACACAGGGAG 17069 Score = 96.9 bits (106), Expect = 4e-14 Identities = 177/256 (69%), Gaps = 5/256 (2%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| | ||| ||||| |||||| |||||||||||| | |||| || | | Sbjct 17525 CCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAAAGCATCGTGCCTCAGCGGCCT 17584 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| || ||||| || |||| |||||| || |||||||| |||||||| Sbjct 17585 GGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTCTGAGGCGGCGA 17644 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC---CCAGT 869807 | || || || || | || ||||| ||||||| || ||||| | | ||||| Sbjct 17645 AGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGTTTGTGAGCTTCCCGTTCCAGT 17704 Query 869808 GGACGGTGTC-GGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTT 869866 || ||| ||| || || | ||| ||| | ||||||| || |||| |||| | Sbjct 17705 CGAAAAGGTCATGCG-AAAGATCAATCTCTTCGACTGTCCAGAATGACGCCTGGGCCCGT 17763 Query 869867 TTGTACATCTCCCATA 869882 |||||||| | ||||| Sbjct 17764 TTGTACATTTGCCATA 17779 >seq13643 Length=1514 Score = 102 bits (112), Expect = 1e-15 Identities = 177/254 (70%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||| ||| ||||| ||||||||||||||||||| | |||| || | ||| Sbjct 102 GAGTGGACGTTTTCGATCATGATCTGGAAGCCGTAAAAGCATCGTGCCTCAGCGGCCTGG 161 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||||| || |||| |||||| || |||||||| ||||||||| Sbjct 162 ACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGACAATGCCGTCTGAGGCGGCGAAG 221 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACAC---CCAGTGG 869809 || || || || | || ||||| ||||||| || ||||| | | ||| | | Sbjct 222 AAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGTTTGTGAGCTTCCCATTCCAATCG 281 Query 869810 ACGGTGTC-GGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | ||| ||| ||| || | ||| ||| | ||||||| ||||||| ||| ||| Sbjct 282 AAAAGGTCATGCG-AGAGATCAATCTCTTCGACTGTCCAGAATGAGGCCTGGGCTCGTTT 340 Query 869869 GTACATCTCCCATA 869882 |||||| | ||||| Sbjct 341 GTACATTTGCCATA 354 >seq17136 Length=3016 Score = 87.8 bits (96), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| ||||||| |||| || || ||||| |||||||| | || | ||||| | Sbjct 943 GCCTCGGTAGCGATGCGCTCGAAGATATCATTGACGAACGAGTTGAGGATGGCCATCGCC 1002 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| ||||| ||| || |||||||| ||||||||||| Sbjct 1003 TTGTTCGAGATACCCGTATCAGGGTGCACTTGCTTGAGCAC 1043 >seq17126 Length=6139 Score = 87.8 bits (96), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| ||||||| |||| || || ||||| |||||||| | || | ||||| | Sbjct 1437 GCCTCGGTAGCGATGCGCTCGAAGATATCATTGACGAACGAGTTGAGGATGGCCATCGCC 1496 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| ||||| ||| || || ||||||||||||||||| Sbjct 1497 TTGTTCGAGATACCCGTATCAGGATGCACCTGCTTGAGCAC 1537 >seq9834 Length=1437 Score = 87.8 bits (96), Expect = 2e-11 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 ||||| || | ||||| |||| ||||||||||| || ||||| | || | ||||| | Sbjct 898 GCCTCAGTCGCAATGCGCTCGAAGATGTCGTTGACGAAGGAGTTGAGGATGGCCATCGCC 839 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| || || ||| ||| |||||||||||||||||||| Sbjct 838 TTGTTTGAAATACCCGTGTCAGGGTGCACCTGCTTGAGCAC 798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105587931297251