Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11274 141 8e-29 seq6477 87.8 1e-12 >seq11274 Length=7584 Score = 141 bits (156), Expect = 8e-29 Identities = 189/263 (72%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 ||| || || ||||| ||||| | || || || | ||| |||||| |||||| || Sbjct 2737 GATCAGGTCCGTCTCGGGGTTCTTGCACGCCTTGCAGAGCACGAACTTGTCGATGAAGCC 2796 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 || ||||| || | | ||| | |||||| | ||||||||||||| | || ||||| Sbjct 2797 GTCGAGCAGCTCGCGCAGCTTCGTCGCGTCGTGCGCGCCGTTGACGATGTAGCGATCGTT 2856 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | |||| | ||| |||||||| ||||||||||| ||| |||| |||||||| | Sbjct 2857 CTTCTCGTCGAACGACGTCTGCGCGCCGAGCTCGCACCCAAAGAACTTGGTCGGGTACGT 2916 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 || ||| || | ||||| || | |||| |||||| | || || |||||||| Sbjct 2917 GGGCGGCCGGCTGAGCGCGCGCGCCACGTCGGACATGTTCGGAAGCACGGTTTTGATGCC 2976 Query 34551 GTTGCCCTTTCCTTCGACCTTGG 34573 |||||||| || |||| ||||| Sbjct 2977 ATTGCCCTTGCCCTCGATCTTGG 2999 >seq6477 Length=89905 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || || || || | ||||||||||| || || | || |||| || Sbjct 7212 AATGCAGATTTTCGTGAAGACGCTTACCGGCAAAACGATCACATTGGAGGTGGAGTCTTC 7271 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||||| ||| | | || || ||||||| ||||| || ||| | || || || Sbjct 7272 GGATACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCGCCTGACCA 7331 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | || || | ||| || || ||| ||||||||| | || | |||||||||| Sbjct 7332 ACAACGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTACAA 7391 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| || || || ||| | ||| | || || | ||||| || || Sbjct 7392 CATTCAGAAGGAGTCGACGCTTCACCTTGTCTTGCGTCTGCGCGGAGG 7439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412746489423179