Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq6477 136 8e-27 seq10137 87.8 4e-12 >seq6477 Length=89905 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | || ||||| || | ||| || || || || ||||| || || ||||| || Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| || || | || || ||||||||||| || | |||||| || || || Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || ||||| || |||||||| || || ||||| || || ||||| || || || Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACC 7260 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || ||||| ||||| || | |||||| || || ||||||||| Sbjct 7259 TCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || || || || ||||| || ||||| || || | | | ||| || || || || Sbjct 7135 GTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTG 7076 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || || || ||||| || | || || || ||||| || || ||||| ||||||||||| Sbjct 7075 CTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTT 7016 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || || || || || || || || || | ||| |||||||| || || Sbjct 7015 CGCCTTAACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGT 6956 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || || || ||||| Sbjct 6955 CAACGTCTTCACGAAGATTTGCAT 6932 >seq10137 Length=11321 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/194 (70%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 || ||||| || || || || || || | | ||| || || || || || ||||| ||| Sbjct 3025 TCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGCTGCTTACCAGCGAAG 3084 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || | | || || || || || || || ||||| || |||||||| || || || || Sbjct 3085 ATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 3144 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTG---CCTGTCAACGTCTTT 82796 || ||||| || || || || || | || || ||||| || ||||||||||| Sbjct 3145 TCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTACCCGTCAACGTCTTG 3204 Query 82797 ACAAATATCTGCAT 82810 ||||| |||||||| Sbjct 3205 ACAAAGATCTGCAT 3218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981589406668117