Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6477 104 2e-17 seq10137 96.9 2e-15 >seq6477 Length=89905 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || |||||||| |||||||| || || |||| ||||| || Sbjct 7643 TGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGC 7584 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || |||| ||||||||||| |||| | || || ||||| ||| || Sbjct 7583 TTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTTG 7524 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 ||| |||| ||| | ||||| || || || || | ||||||||| ||||| || Sbjct 7523 GCCTTC-ACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGT 7465 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || ||||| || ||||| Sbjct 7464 GAGGGTCTTCACAAAAATTTGCAT 7441 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || ||||||||||| || || || || | || ||||| || || || ||||| Sbjct 7404 CTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATCCTCCAACTGCTTCCCAGCAAA 7345 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 |||| || || || || |||| | || || ||||| ||| ||| ||| |||| Sbjct 7344 GATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTC-ACAT 7286 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||| || || ||||| || | ||||||||||| || || | ||| || | Sbjct 7285 TGTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCA 7226 Query 33737 CAAAGATCTGCAT 33749 | || |||||||| Sbjct 7225 CGAAAATCTGCAT 7213 >seq10137 Length=11321 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 33541 ACCAA-ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || |||||||| || || |||||||| ||||| || ||||| | || || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || || || || || ||||| |||||||| || | || | ||| || ||||| Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 3125 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 ||| ||| || | | | ||| | ||||| || ||||| || | ||||| || | Sbjct 3126 AATCTTCGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCT 3184 Query 33719 T---ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | ||| || ||||| || ||||||||||||||| Sbjct 3185 TCTTACCCGTCAACGTCTTGACAAAGATCTGCATA 3219 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | ||| | || || |||||||| || || ||||||||||| || Sbjct 2701 ACCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGA 2760 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | || || || || || || | ||||||||| || |||| Sbjct 2761 GAGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGG 2820 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || ||| ||| |||| ||| | |||||| || || | Sbjct 2821 AATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCCGACGACTCGA 2879 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||||| || || || | || || || || |||||||| Sbjct 2880 CCTCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 ||||| | |||||| ||| || || || ||||| || || || || || |||| ||| Sbjct 3296 ACCAAGGGGAGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCC 3355 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | || || |||||||| || | ||||||||| || | || | || || ||||| Sbjct 3356 AGCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 3415 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| || | | | ||| | ||||||| || ||||| || | ||||| || || Sbjct 3416 ATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTT 3474 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || || || || || |||||||||||| Sbjct 3475 GCCGGTCAAGGTCTTCACGAAGATCTGCATA 3505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328628273069760