Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq15036 111 1e-19 seq13613 82.4 7e-11 >seq15036 Length=18609 Score = 111 bits (122), Expect = 1e-19 Identities = 316/484 (65%), Gaps = 10/484 (2%) Strand=Plus/Plus Query 146902 TGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGAC 146961 || ||||||||||| |||||||| | | ||| | ||||| ||| | ||||| || | Sbjct 10655 TGGAACTCGCCCGCGAGCACACGACGGGTATAGATGTTGCTGGTGTAGGGCTCGAAGCAT 10714 Query 146962 TCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAA 147021 || || ||||| | || || | ||||| || ||||||||| ||| || | | ||| Sbjct 10715 TCGTTGTTGCCCAGAATCTGCGACGTGGAGGCTGTAGGCATGGGCGCGACGAGGAGTGAG 10774 Query 147022 TTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAG 147081 || | || |||| | || ||| ||| | | ||||||||| | || Sbjct 10775 TTCCTCAAGCCGTGCTGGGCGACCTTGGACTTGAGGCTAGCCCAGTCCCAGAGGTCCGTT 10834 Query 147082 GGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAAC 147141 || || ||| ||||| ||||||||| ||| ||| || || ||||| || || || Sbjct 10835 GGAGTAACGCCCCACAGGTCGTACTGCAGCTGGCCTTGAGAAGCAGGACTACCCTCGTAC 10894 Query 147142 GTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTAT 147201 || |||| || || ||| |||| || || ||||| || | || ||| ||| Sbjct 10895 GTTTCGTAGGGACCTTCAGCCTGGGCCATCTCGCAACTTGCTTCAACAGCGGCATGGTAG 10954 Query 147202 ATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCATACGC 147261 || ||||| | ||||||| ||| || ||| || || || | |||||||| Sbjct 10955 ATCGTTTCAGAGATTTGTAGGTTGAGCTTCCGCGCCTCGACGGAGTCAAACGGCATACGG 11014 Query 147262 AGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATG----CTT 147317 || || ||| ||||| || | |||||| | |||| |||||| || || || | Sbjct 11015 AGCGCCATAAAAGCATCCGCAAGACCCTGCACGCCGATGCCGATGGGACGGTGGCGCATG 11074 Query 147318 TTCG-TTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGA 147376 |||| | |||||||| | ||||| |||| ||||| || || || ||||| Sbjct 11075 TTCGAGCGGCGCGCTTCG-----GGAATGGGGTAGTAGTTGCCGTCGATGATGCGGTTGA 11129 Query 147377 GGTT 147380 |||| Sbjct 11130 GGTT 11133 >seq13613 Length=18521 Score = 82.4 bits (90), Expect = 7e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 47118 TCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTG-TTGGTGCAGCTCGGACAACC 47176 || |||||| |||| || |||||||| ||||| | ||| ||| ||| |||||| | Sbjct 17036 TCGATGTGCCAATACATCGAGTTTGTAGCGGACAGGCTGCTTGTTGCT-CTCGGAAATGA 16978 Query 47177 GAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAA 47236 ||| | | || | ||| |||||||| || ||| ||| |||||||| ||||| || Sbjct 16977 GAAGCACTACAACTCAAATAACCCGTTTGACTTCATGGACATGATTTCGCTTGAGGGGAA 16918 Query 47237 AACCAATTTTTTCGAGAAACGAGT 47260 ||||| || ||||||||||| || Sbjct 16917 GACCAACTTCTTCGAGAAACGGGT 16894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476498582731080