Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10137 131 2e-25 seq6477 116 3e-21 >seq10137 Length=11321 Score = 131 bits (144), Expect = 2e-25 Identities = 160/214 (75%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| | ||| |||||||| ||||||||||| |||| || ||| || | || || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||||| || || ||||| ||||||||||| | || | | |||||||||| Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 3125 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGA---TCG 35702 ||||| ||| | |||| | | |||||| || |||||||| | |||| || Sbjct 3126 AATCTTCGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCT 3184 Query 35703 TTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||||||||||| || || ||||| |||||||| Sbjct 3185 TCTTACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || ||||||||||| | | || ||| | || || |||||||| ||| Sbjct 2732 GTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGCTTGCCC 2791 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | ||||||||||| | |||| | |||||||||| |||||| |||| Sbjct 2792 GCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTC 2851 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| ||| || ||||||| |||||||| || ||||| | || Sbjct 2852 ACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTGAGGGTC 2911 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 2912 TTGACGAAAATCTGCAT 2928 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || | | || || |||| |||||||||||||| ||||| Sbjct 3313 CTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCGGCAAA 3372 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || |||||||||| |||||| ||| | || Sbjct 3373 GATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGA-CGT 3431 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || |||||||| | ||||| || || || ||||| || |||| Sbjct 3432 TGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCA 3491 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3492 CGAAGATCTGCAT 3504 >seq6477 Length=89905 Score = 116 bits (128), Expect = 3e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | ||| || | || |||| |||||| || ||||| Sbjct 7404 CTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATCCTCCAACTGCTTCCCAGCAAA 7345 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || || ||||| | |||| || |||||||||| ||||| ||||| | | Sbjct 7344 GATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATT 7285 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || |||||||||| ||||||||||| || || | || ||||| Sbjct 7284 GTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCAC 7225 Query 35725 AAATATCTGCATTC 35738 || |||||||||| Sbjct 7224 GAAAATCTGCATTC 7211 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || |||| |||||| || | || || |||||||| || || || Sbjct 7123 CTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTCCCGGCGAA 7064 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||| | ||| || || | | || Sbjct 7063 GATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGT-CTTGAATCTTCGCCTTAACGT 7005 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||| | |||||||| || || ||||| || |||| Sbjct 7004 TGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGTCTTCA 6945 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 6944 CGAAGATTTGCAT 6932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450687083107240