Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6477 109 6e-19 seq10137 105 7e-18 seq17864 86.0 6e-12 seq13619 84.2 2e-11 >seq6477 Length=89905 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || ||||| || ||||| ||||| || ||||| ||||||||||| || | Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || || | ||| || || ||||| |||| || || || || ||||| Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || || || ||| | || || || || ||||| Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACC 7260 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || || ||||| ||||| | || || |||||||| |||||| Sbjct 7259 TCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 14/209 (7%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| ||| ||||| ||||||||||||||| | ||| || ||| ||| Sbjct 6912 ACGAGGTGCAGC------TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 6859 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||| | ||||| || | ||||||||| || ||||| ||||| || || || ||| Sbjct 6858 AGCCG-------GCAAAGATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGA 6806 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||||| || | ||||||||||| ||||| ||||| || || || || Sbjct 6805 ATTTTCGCCTTGACGTTATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT- 6747 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | || || ||||| || ||||| Sbjct 6746 CCCGTGAGGGTCTTGACGAAGATCTGCAT 6718 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| || ||| ||||| || |||||||||||| | || | ||| || | Sbjct 7648 CGAGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCA 7589 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 ||| || || || || |||| ||||||||||| ||||| || || || || || |||| Sbjct 7588 ACTGCTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAA 7529 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || || || ||| | ||||| || || || || || || || || || |||| Sbjct 7528 TCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTAC 7469 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || || ||||||||||| Sbjct 7468 CCGTGAGGGTCTTCACAAAAATTTGCAT 7441 >seq10137 Length=11321 Score = 105 bits (116), Expect = 7e-18 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 || || |||||| ||||| ||||||||||||||| | |||| || || |||||| Sbjct 3010 AGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGC 3069 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || ||||| |||||||| || || || || || || || || ||||| Sbjct 3070 TGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAATC 3129 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG---TTTTA 134684 || ||||| ||| | ||||| || || ||||| ||||| || || | | ||| Sbjct 3130 TTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTTA 3189 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || ||||| Sbjct 3190 CCCGTCAACGTCTTGACAAAGATCTGCAT 3218 >seq17864 Length=12555 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 |||||| || | || |||| ||| ||||| || ||| | ||| | ||||||||||| Sbjct 12515 CTTTCCGCCGCGAAGACGCAGCACAAGGTGGAGTGTGCACTCCCTCCCGATGTTGTAGTC 12456 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || | ||| | ||| |||||||| || || ||||| || || || ||||| ||||| Sbjct 12455 GCGGAGAGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAACCGTTGCTGGTCGGG 12396 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGA 134637 ||| || || || || || || ||| || ||||| Sbjct 12395 CGGGATTCCCTCCTTGTCCTGGATTCTTAATTTGA 12361 >seq13619 Length=8937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 21721 CAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGA 21780 || || || | |||||||| |||||||| ||||| || | ||||| |||||||||| Sbjct 665 CATGCGAAGTCGGTGTGCATACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGTGAGA 606 Query 21781 CCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaaaaC 21840 |||||||| || || || || || | | || |||| ||||||| || || || || Sbjct 605 CCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACCCAGAGAAGAAG 546 Query 21841 ACGCCCTCCACAATGGCGAACGCCACCATGCGCCGCGCCAA 21881 | ||||| || |||||| || || | |||| ||| || Sbjct 545 ATACCCTCGACCGCGGCGAAGGCGACAAGGCGCTCCGCGAA 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505278980675560