Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq15036 145 1e-29 seq11160 86.0 8e-12 >seq15036 Length=18609 Score = 145 bits (160), Expect = 1e-29 Identities = 307/454 (68%), Gaps = 13/454 (3%) Strand=Plus/Plus Query 111348 TGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAA 111407 ||||| |||||||||||||||||| | || ||| ||||| |||| || | || | Sbjct 11369 TGTTGGCAGCATCCTTGTAGAGCATGAAAGGGCCCCCGGTCTCAATCTGAGACTCCAGGA 11428 Query 111408 TAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCG 111463 |||| | ||||| | || | | || | |||| || || || ||||| |||| Sbjct 11429 TAGCGTACCAAAGCTTCTGAGCCTCG----ATGGTCTTCCGTGCACGACCCTCACGCTCG 11484 Query 111464 TACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTG 111523 |||| ||| ||||| || ||||| |||||| | ||| ||| || ||||||| | Sbjct 11485 TACTGCTCGTAAAGGGCCTCGAACTCGTCACCCCAAACCTCGTGGAGGCCAGGTGCCTCG 11544 Query 111524 TCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGA 111583 | |||||||| || ||||||| ||||| |||| || ||||||||||| || || || Sbjct 11545 TTGGGACAGAACAGTGACCATTTGCCACCCGCCTCGACGCGCTTCATGAACAGATCGGGG 11604 Query 111584 ATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 111643 ||||||| || | ||||| || | || |||| || | || ||||| || Sbjct 11605 ATCCACAAGGCGTAGAAGAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGG 11664 Query 111644 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC- 111702 | || | |||||| | | || || ||||||||||| || |||| |||| | || Sbjct 11665 AGGTCGATGAACTCGAACACGTCGGCATGCCATGGCTCGAGGTAGATAGCGAAGGCACCA 11724 Query 111703 ---CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | || | | ||| | || | ||||| ||||| |||| || |||| || ||||| Sbjct 11725 GGACGTTTGTTG-CCACCCTGGTCCACATACCGCGCGGTGGAGTCGTATACACGGAGCAT 11783 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 |||| || || | || | |||||| || ||| Sbjct 11784 AGGAACGATGCCGTTCGAGTAACCATTGGTTCCC 11817 Score = 82.4 bits (90), Expect = 1e-10 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 111866 GCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGG 111925 || || ||| | || || | |||||||| | || || || ||||| || | ||| Sbjct 11943 GCGCAGTCCTTGAGCGTCTCGTAGATACCCTCTATGGAATCGTCCTTCATGCAAACGAGG 12002 Query 111926 AAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGA 111985 ||||| | |||||| || | || |||||||| ||||||||||| || | ||| || Sbjct 12003 AAGCATGAGCTCATCTGAGGGTTGGGAGTACCAGCGTTGAAGAGGGTGGGCGATGCATGG 12062 Query 111986 ATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 112045 |||| || | |||||| || ||| || | || || || ||||| |||| Sbjct 12063 GTGAAGTAACGCTCGGACATGAGGTTGTACGTTTGCAGAACGCGTTCGATGTCGGCCCCA 12122 Query 112046 TGGATGCCGATTGCGACCCGCATGA 112070 |||||||||| ||||| ||||||| Sbjct 12123 TGGATGCCGACGGCGACACGCATGA 12147 >seq11160 Length=6248 Score = 86.0 bits (94), Expect = 8e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 110755 TTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTT-CT 110813 ||| ||||||||||| || ||||| | ||| |||| | |||||| | ||| | Sbjct 4564 TTGCGCGGTGGAGGCAGTAGGCATCTGGGCCGTCAACATCGAGTTACGCAAACCGACACG 4623 Query 110814 CCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACA 110873 ||| || | ||| ||||| | ||||||| | | ||| ||| | |||||| Sbjct 4624 TCTT-ATCCTCTCCCTGAGAGACTGGAAGTCGTAATGATCCGAGGTATCAGCCCCCCACA 4682 Query 110874 TGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTT 110933 |||| | ||| ||||| |||||||| || || || || | | | || || | |||| Sbjct 4683 TGTCGACCTGGAGCACACCTTGGGAAGCCGGTGACCCAGCCCACATGTCGTATGGACCTG 4742 Query 110934 GGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATAC 110993 || ||||||||||||||||| ||||||| | || || || || || || ||||| | Sbjct 4743 CAGCCTCAGCCAATTCACAGCTACCCTCCAGCGCGGCATGGTATATCGTCTCGAAGATGC 4802 Query 110994 G 110994 | Sbjct 4803 G 4803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627883603888800