Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq13619 132 6e-26 seq15036 125 9e-24 seq13613 107 2e-18 seq5406 87.8 2e-12 >seq13619 Length=8937 Score = 132 bits (146), Expect = 6e-26 Identities = 345/515 (67%), Gaps = 17/515 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| | |||||||||||| |||||||| || |||||||| ||||| ||||| | || Sbjct 651 GTGCATACCCTCGTCACGCGAGATGAGCTCGTTCGAGAACGTGAGACCGGGCATCAAGCC 592 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | ||| || |||||||||||||| ||||| || Sbjct 591 GCGCTTCTTGAGCCAGAAGATTGACGCAAAGGACCCAGAGAAGAAGATACCCTCGACCGC 532 Query 130147 CGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGGGACTTTGTATC---AAACCACTTCA 130202 ||||| || | || ||||| || |||| | |||| ||||| | ||| | Sbjct 531 GGCGAAGGCGACAAGGCGCTCCGCGAAAGTA----GACTCCGTATCCGAGATCCAGCGGA 476 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 ||||| | ||||| |||| ||| || |||| ||| | || || || ||||| | || Sbjct 475 GTGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTTTCAATTGCATCGAAGAGGTGCT 416 Query 130263 -TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGG 130321 | | || || ||||||||||| | || ||||| || || |||||| ||| Sbjct 415 CACGCTGCT-TGGGGTCTTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTTTCGGAGTGG 357 Query 130322 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 130380 | | | ||| || | ||| | ||||||| |||| || || ||| ||||| Sbjct 356 ATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGGGCCTCAGCGGCCTGGACCTC 298 Query 130381 ATCTGCAAAATTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 130439 | || | || ||| || ||||| ||||| ||||| || | || || || | Sbjct 297 GT-TGGAGAAACGTTCGACGAGGTTCTCGTTCACAATACCATCTGAGGCGGCGAAGAAGG 239 Query 130440 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 130496 | |||| || ||||| | | |||| ||||| | || | | ||| |||| | Sbjct 238 CGAGGACATGAGAGATGAAGTGGCGCTCATCGTCGTTGAGACGGTTGTGCCAATCGTGGA 179 Query 130497 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCAA 130531 ||||||| || ||||| | ||||||||| |||||| Sbjct 178 GATCCTTGGAAAGATCCATCTCCTCCGCGGTCCAA 144 >seq15036 Length=18609 Score = 125 bits (138), Expect = 9e-24 Identities = 299/448 (67%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 118830 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 118889 ||||||||||| |||||| | || ||| ||||| | || |||| || ||||| | | Sbjct 11377 GCATCCTTGTAGAGCATGAAAGGGCCCCCGGTCTCAATCTGAGACTCCAGGATAGCGTAC 11436 Query 118890 CAGA-CATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCCCCTCTTCCTCGTACTTTGT 118945 || | | || | ||| | | ||| || || || ||||| |||||||| Sbjct 11437 CAAAGCTTCTG-AGC---CTCGATGGTCTTCCGTGCACGACCCTCACGCTCGTACTGCTC 11492 Query 118946 GTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 119005 ||| ||||| || ||||| |||||| |||| ||| || ||||||| | || || Sbjct 11493 GTAAAGGGCCTCGAACTCGTCACCCCAAACCTCGTGGAGGCCAGGTGCCTCGTTGGGACA 11552 Query 119006 GAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAG 119065 ||| || ||||||| |||||| |||| || ||||||||||| || || |||||||| | Sbjct 11553 GAACAGTGACCATTTGCCACCCGCCTCGACGCGCTTCATGAACAGATCGGGGATCCACAA 11612 Query 119066 CGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAA 119125 || ||||||| || || ||| | || || | || || || || | || | Sbjct 11613 GGCGTAGAAGAGGTCACGGGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGGAGGTCGAT 11672 Query 119126 AAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG 119185 || || | | || || ||||| || || ||||| | |||| | || | |||| Sbjct 11673 GAACTCGAACACGTCGGCATGCCATGGCTCGAGGTAGATAGCGAAGGCACC---AGGACG 11729 Query 119186 ------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAAT 119239 ||| |||||| ||||||| ||| |||| || ||||||| ||||| |||| Sbjct 11730 TTTGTTGCCACCCTGGTCCACATACCGCGCGGTGGAGTCGTATACACGGAGCATAGGAAC 11789 Query 119240 GATACCATCGGATTGGCCATTTGTCCCC 119267 ||| || | || | ||||| || ||| Sbjct 11790 GATGCCGTTCGAGTAACCATTGGTTCCC 11817 >seq13613 Length=18521 Score = 107 bits (118), Expect = 2e-18 Identities = 187/270 (69%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 |||||||| || || ||||| || || ||||| ||| || |||||||| || |||||| Sbjct 17245 CCCTCGTCGCGCGATATGAGCTCGTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTC 17304 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | |||||| || | ||| | ||||||||||| || |||||||| ||| ||| Sbjct 17305 TTGAGCCAGAAGATGGAGGCAAAACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAAC 17364 Query 130154 GCAAAGAGACGCTCAGCAAA---GGAGCGGGACTTTG-TATCAAACCACTTCATCGCCCA 130209 || | || |||||||| || ||| || | | |||| ||| || ||||| Sbjct 17365 GCCACCAGTCGCTCAGCGAACACGGACTGGTCGTCCGCTATCCAAC----GCAATGCCCA 17420 Query 130210 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 130269 | ||||| |||| |||||| || | ||| | ||| || || ||||| || ||| Sbjct 17421 GTCGGCCTTCTTCTTGATACAGGGTATGGTTTCGATTGCGTCGAAGAGGAAGGTCCGTTC 17480 Query 130270 TGATGGATCTTTGATGTACTTATCTATGAG 130299 |||||| |||| || |||| ||||| Sbjct 17481 GTCGGGATCTCTGATATAAGTATCGATGAG 17510 >seq5406 Length=1760 Score = 87.8 bits (96), Expect = 2e-12 Identities = 85/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 179956 TTCCCACGGAGAGGGAACACACCGTA-GTGATCACGACCAACCACAGAGAGACCAGCAAC 180014 || || || || |||||||| ||||| ||| |||||||| |||||| || ||||| | Sbjct 719 TTTCCGCGAAGCGGGAACACGCCGTACGTG-TCACGACCGACCACACCCAGCCCAGCGAT 661 Query 180015 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACT 180061 ||||| | ||| ||||| |||||||| || | |||||||||||||| Sbjct 660 CGCGAGCGCCTTGGCGGAGTCACCCTCAGTGAGGATGAGCGTACACT 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618289071492680