Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq15036 150 2e-31 seq13619 116 4e-21 seq13613 100 3e-16 seq11160 82.4 9e-11 >seq15036 Length=18609 Score = 150 bits (166), Expect = 2e-31 Identities = 304/444 (68%), Gaps = 9/444 (2%) Strand=Plus/Minus Query 104512 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 104571 ||| || |||||| | || | || || |||| ||||| || |||| || |||| || Sbjct 11817 GGGAACCAATGGTTACTCGAACGGCATCGTTCCTATGCTCCGTGTATACGACTCCACCGC 11758 Query 104572 GCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGC 104627 ||| ||||| | || | ||| | | || | || | |||| |||| || |||| Sbjct 11757 GCGGTATGTGGACCAGGGTGG-CAACAAACGTCCTGGTGCCTTCGCTATCTACCTCGAGC 11699 Query 104628 CATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG 104687 ||||||| || || | | |||||| | || | || ||||| || | ||||||| Sbjct 11698 CATGGCATGCCGACGTGTTCGAGTTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGG 11639 Query 104688 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 104747 || ||| || ||||||| ||| | ||||| || ||||| ||||||||| | || | Sbjct 11638 TCCGCGCCCGTGACCTCTTCTACGCCTTGTGGATCCCCGATCTGTTCATGAAGCGCGTCG 11579 Query 104748 AGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCG 104807 ||| | ||||||| ||||| || || ||||| || |||||||||| ||| ||| | Sbjct 11578 AGGCGGGTGGCAAATGGTCACTGTTCTGTCCCAACGAGGCACCTGGCCTCCACGAGGTTT 11519 Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTG-CG 104866 |||||| ||||| || ||||||||| |||||||| || ||||| || || | | Sbjct 11518 GGGGTGACGAGTTCGAGGCCCTTTACGAGCAGTACGAGCGTGAGGGTCGTGC-ACGGAAG 11460 Query 104867 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925 || | | || | || | | ||| | ||||| || ||||||| | ||||| || Sbjct 11459 ACCAT-CGAGGCTCAGAAGCTTTGGTACGCTATCCTGGAGTCTCAGATTGAGACCGGGGG 11401 Query 104926 ACCATACATGCTTTACAAAGACGC 104949 || | |||||| ||||| || || Sbjct 11400 CCCTTTCATGCTCTACAAGGATGC 11377 >seq13619 Length=8937 Score = 116 bits (128), Expect = 4e-21 Identities = 168/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| ||||| || || || |||| | || || || | ||||| || || ||||| Sbjct 416 AGCACCTCTTCGATGCAATTGAAACCATCCCCTGCATCAAGAAGAAGGCCGACTGGGCAC 475 Query 94769 TGAAGTGGTTT---GATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | ||| | ||||| |||| | | || || ||||| || |||| || || Sbjct 476 TCCGCTGGATCTCGGATACGGAGTC---TACTTTCGCGGAGCGCCTTGTCGCCTTCGCCG 532 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGA 94884 || |||||||||||||||||||| ||||| |||| | || | |||||||||||||| Sbjct 533 CGGTCGAGGGTATCTTCTTCTCTGGGTCCTT-TGCGTCAATCTTCTGGCTCAAGAAGCGC 591 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 || | ||||| |||||| ||||| |||||||| ||||| ||||||||||| Sbjct 592 GGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGACGAGGG 644 >seq13613 Length=18521 Score = 100 bits (110), Expect = 3e-16 Identities = 161/227 (71%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || || ||| |||| | || ||||| | ||||| || || ||||| || Sbjct 17468 CTCTTCGACGCAATCGAAACCATACCCTGTATCAAGAAGAAGGCCGACTGGGCATTGCGT 17409 Query 94774 TGGTTTGAT-ACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT 94830 ||| | | || | |||| ||| || ||||||||||| | || |||||| || Sbjct 17408 TGGATAGCGGACGACCAGTC-CGTG--TTCGCTGAGCGACTGGTGGCGTTTGCGGCCGTG 17352 Query 94831 GAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTC 94890 ||||| || ||||||||||| | || | | || | |||||||||||||| || ||| Sbjct 17351 GAGGGCATATTCTTCTCTGGGTGTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGGCTC 17292 Query 94891 ATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||| || || ||||| |||||||| || || || |||||||| Sbjct 17291 ATGCCCGGCCTGACGTTCTCAAACGAGCTCATATCGCGCGACGAGGG 17245 >seq11160 Length=6248 Score = 82.4 bits (90), Expect = 9e-11 Identities = 169/249 (68%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGG 105362 |||| | ||||| || ||||| || || || ||||| || |||| || | || |||| Sbjct 4811 TCAACGTCCGCATCTTCGAGACGATATACCATGCCGCGCTGGAGGGTAGCTGTGAATTGG 4752 Query 105363 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTC 105422 | |||| || |||||||| || | | | || || || ||||| ||||| ||||| | Sbjct 4751 CTGAGGCTGCAGGTCCATACGACATGTGGGCTGGGTCACCGGCTTCCCAAGGTGTGCTCC 4692 Query 105423 AATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAAC 105482 | | || ||||||| | ||| ||| | ||| ||||||| | |||||| ||| Sbjct 4691 AGGTCGACATGTGGGGGGCTGATACCTCGGATCATTACGACTTCCAGTCTCTCAGGGAGA 4632 Query 105483 GCATCA-AGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCC 105541 | || | | | | || | | |||||| | | | ||| | ||||| || |||||| Sbjct 4631 GGATAAGACGTGTCGGTT-TGCGTAACTCGATGTTGACGGCCCAGATGCCTACTGCCTCC 4573 Query 105542 ACCGCACAA 105550 ||||| ||| Sbjct 4572 ACCGCGCAA 4564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583122982763720