Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq6477 136 1e-26 seq10137 118 3e-21 >seq6477 Length=89905 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 ||||| ||||| || ||||| || ||||| || ||||| || | || || ||||| || Sbjct 7421 ACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATCCTCC 7362 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 | || || ||||||||||| || ||||| || ||||| ||||| || || || |||||| Sbjct 7361 AACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTCCTGA 7302 Query 140649 ATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTT 140708 || || || || ||||| || || | ||| || | || || || | ||| | || || Sbjct 7301 ATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGTTTTG 7242 Query 140709 CCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| || || || || |||||||||||| Sbjct 7241 CCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 Score = 113 bits (124), Expect = 1e-19 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || || || || || || || | || ||||| || || | || || ||||| || Sbjct 7632 CTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGCTTCCCAGCGAA 7573 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| || || ||||||||||| ||||| || || || |||||||| || || || ||||| Sbjct 7572 GATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATCTTGGCCTTCACATT 7513 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 || |||| || || | ||||| || || || | ||||| || || || || || || Sbjct 7512 GTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCCGTGAGGGTCTTCAC 7453 Query 140726 AAAAATCTGCAT 140737 |||||| ||||| Sbjct 7452 AAAAATTTGCAT 7441 Score = 111 bits (122), Expect = 5e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 || ||||| || ||||| || || || ||||| || || || || || ||||| ||||| Sbjct 7137 AGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGC 7078 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || || || ||||| ||||| ||||| || ||||| || || || || || ||||| Sbjct 7077 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATC 7018 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || || || || || | || || | || || || || || | ||||||||| Sbjct 7017 TTCGCCTTAACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCG 6958 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || | || || || || || ||||| Sbjct 6957 GTCAACGTCTTCACGAAGATTTGCAT 6932 Score = 84.2 bits (92), Expect = 7e-11 Identities = 134/192 (70%), Gaps = 8/192 (4%) Strand=Plus/Minus Query 140546 CTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAA 140605 ||| || ||||| || || || || | || || || || || || || ||||| Sbjct 6901 CTCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAG-------CCGGCAAA 6849 Query 140606 GATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATT 140665 ||| ||||| ||||| ||||| || || || || || ||||||||||| || || || || Sbjct 6848 GATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTGACGTT 6789 Query 140666 ATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| || | || || | || || || || || | ||| |||| || || || || || Sbjct 6788 ATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTC-TTCCCGTGAGGGTCTTGAC 6730 Query 140726 AAAAATCTGCAT 140737 || |||||||| Sbjct 6729 GAAGATCTGCAT 6718 >seq10137 Length=11321 Score = 118 bits (130), Expect = 3e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || ||||| || || || ||| || || || || |||||||| Sbjct 2701 ACCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGA 2760 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || |||||||| ||||| || || || || ||||| ||||| ||||| || || || Sbjct 2761 GAGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGG 2820 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 ||| || || || ||||| || || || || ||||| || || | || || | || || Sbjct 2821 AATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGAC 2880 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || | || | ||||| || || || || || || ||||||||||| Sbjct 2881 CTCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514887413434109