Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq15036 223 4e-53 seq13619 125 8e-24 seq13613 125 8e-24 seq15381 82.4 8e-11 >seq15036 Length=18609 Score = 223 bits (246), Expect = 4e-53 Identities = 657/997 (66%), Gaps = 37/997 (4%) Strand=Plus/Minus Query 19844 AAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATCATG 19903 ||||| || ||| ||||| |||| | |||||||| |||||||| || || || ||||| Sbjct 11316 AAGTCGAACCAGCAGAACCTCGGTACCATCAAGTCATCCAACCTATGCACAGAGATCATC 11257 Query 19904 GAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCGACT 19963 ||| |||| || || |||||||| || || ||||| || ||| | ||| || | Sbjct 11256 GAGTATTCCTCTCCCGATGAGACTGCTGTCTGCAATCTTGCTTCCATTGCCCTTCCCTCC 11197 Query 19964 TTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACG 20023 ||| || ||| | | | |||| || || ||| || | ||||||| | Sbjct 11196 TTCATCGAGGATGGCAAGTACAACTTCAAGAAGCTGCACGCTGTTGCGAAGGTCGTCGCC 11137 Query 20024 CGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA---CCGAGGCGGCGCGCAAG 20080 || || || ||| ||||||| | |||| ||||| | |||| ||| ||| Sbjct 11136 TTCAACCTCAACCGCATCATCGACGGCAACTACTACCCCATTCCCGAAGCGCGCCGC--- 11080 Query 20081 TCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATG 20140 ||||| ||||||||||| || |||| |||||||| ||||| || || || | ||| ||| Sbjct 11079 TCGAACATGCGCCACCGTCCCATCGGCATCGGCGTGCAGGGTCTTGCGGATGCTTTTATG 11020 Query 20141 ATGCTCGGCCTCTCATTCGACGATCC--CAAGGCGCGCGAGCTCAACAAGGGCATCTTCG 20198 |||| | | | || ||| ||| | ||||||| |||||||| |||| | Sbjct 11019 GCGCTCCGTATGCCGTTTGAC--TCCGTCGAGGCGCGGAAGCTCAACCTACAAATCTCTG 10962 Query 20199 AGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGT 20258 | | | ||||| || || | | | ||||| | ||| | | || || || | Sbjct 10961 AAACGATCTACCATGCCGCTGTTGAAGCAAGTTGCGAGATGGCCCAGGCTGAAGGTCCCT 10902 Query 20259 ACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCG 20318 |||| |||| | |||| || || || | || || ||| ||| ||||||||| Sbjct 10901 ACGAAACGTACGAGGGTAGTCCTGCTTCTCAAGGCCAGCTGCAGTACGACCTGTGGGGCG 10842 Query 20319 TCACTGAGAATGAGTTTTGGAGC---GC---CCTCAAGGTTGAGATCAAGACC--CACGG 20370 | ||| | || | ||| | || ||||||| || || | || ||||| Sbjct 10841 TTACTCCAACGGACCTCTGGGACTGGGCTAGCCTCAAGTCCAAGGTC--GCCCAGCACGG 10784 Query 20371 GCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGG 20430 | | ||||| | ||||||||||||||||| || ||||| || | ||||| |||| Sbjct 10783 CTTGAGGAACTCACTCCTCGTCGCGCCCATGCCTACAGCCTCCACGTCGCAGATTCTGGG 10724 Query 20431 GAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGG 20490 |||||||| |||||||| ||||| | ||||||||| |||||| || || || Sbjct 10723 CAACAACGAATGCTTCGAGCCCTACACCAGCAACATCTATACCCGTCGTGTGCTCGCGGG 10664 Query 20491 TGAGTTCGTCATGGTAAACAAGCACCTGG----TCCGCGA-CTTGCAGAAGATCGATATG 20545 |||||| || || || | ||| |||| || |||| || | ||| | Sbjct 10663 CGAGTTCCAGATCGTGT----GCCCTTGGCTCCTCCGTGAGCTTGTCGA-GCTCGGCCTC 10609 Query 20546 TGGTCGCCCAAAATTAAGAA--TGAAATTGTCCGAGCCGGCGGGAGCGTCCAGG-CATTG 20602 ||| | | || ||||| ||| | || | | |||| || ||| ||| | Sbjct 10608 TGGAACGACGACATGAAGAACATGATCATCGCCAA--CAACGGGTCTGTGCAGAACATCG 10551 Query 20603 G-AT-ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGA 20660 || |||||| || || | |||| ||||||| ||| |||||||| ||| | ||||||| Sbjct 10550 ACATCATCCCCGAGGACGTGAAGGCGATTTACAAGACTGTATGGGAGATCTCGCAGAAGA 10491 Query 20661 GCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATG 20720 || ||||| |||| || || |||||||| | |||| |||||| ||||| ||||| | Sbjct 10490 AGGTCCTCGACCTGGCCGCGGACCGCGGCGCATTCATCTGCCAGTCGCAGTCTCTCAACG 10431 Query 20721 TCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACA 20780 | | || | |||| | | |||||| ||||||| | ||||||||| | | Sbjct 10430 TGCACTTGCAAGCGCCGACCAACGGACAGCTGACGAGCATGCATTTCTACGGCTGGAAGA 10371 Query 20781 AGGGGCTCAAGACGGGCATGTACTATCTGCGGACCCG 20817 |||| || ||||||||||||||||| || || || || Sbjct 10370 AGGGTCTGAAGACGGGCATGTACTACCTCCGCACACG 10334 Score = 159 bits (176), Expect = 4e-34 Identities = 199/269 (74%), Gaps = 8/269 (3%) Strand=Plus/Plus Query 79628 TCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGCGC 79687 |||| |||||||| | || || |||||||| |||| |||| ||| |||| Sbjct 11887 TCGCACGAATGTTATGGATGTTGAGACCGATGCCACCGGCTGTCTTGCTGATCATGGCGC 11946 Query 79688 ACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGC 79747 | |||||||||||||||||||| ||||| || || ||||||||||| || ||||||| Sbjct 11947 AGTCCTTGAGCGTCTCGTAGATACCCTCTATGGAATCGTCCTTCATGCAAACGAGGAAGC 12006 Query 79748 ---AGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCG 79804 |||| |||||| |||||| ||||| |||||||||||||| |||| || || | Sbjct 12007 ATGAGCT---CATCTGAGGGTTGGGAGTACCAGCGTTGAAGAGGGTGGGCGATGCATGGG 12063 Query 79805 TGAAG-AACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCG 79863 ||||| ||| | || ||| || | |||||| | | ||||| || |||| | || Sbjct 12064 TGAAGTAACGCTCGG-ACATGAGGTTGTACGTTTGCAGAACGCGTTCGATGTCGGCCCCA 12122 Query 79864 TGGATGCCGACCGCGACGCGCATGAAGAG 79892 ||||||||||| ||||| ||||||| ||| Sbjct 12123 TGGATGCCGACGGCGACACGCATGAGGAG 12151 Score = 136 bits (150), Expect = 4e-27 Identities = 206/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 19413 ACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGG 19472 |||| ||||| || |||||||| || | | || ||| || |||| || ||||||| | Sbjct 11797 ACGGCATCGTTCCTATGCTCCGTGTATACGACTCCACCGCGCGGTATGTGGACCAGGGTG 11738 Query 19473 GCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGG 19532 || |||||| || | ||||| |||||||||||||||||||| || ||||| | | Sbjct 11737 GCAACAAACGTCCTGGTGCCTTCGCTATCTACCTCGAGCCATGGCATGCCGACGTGTTCG 11678 Query 19533 ATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCA 19592 | ||| |||| || ||| |||||| || | |||||| | ||| || ||||||||| Sbjct 11677 AGTTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCCCGTGACCTCTTCT 11618 Query 19593 CGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACC 19652 ||||||||||| || || || |||||| || || ||| || | ||||| | Sbjct 11617 ACGCCTTGTGGATCCCCGATCTGTTCATGAAGCGCGTCGAGGCGGGTGGCAAATGGTCAC 11558 Query 19653 TGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTC 19705 || | || || |||| |||||||| | ||| || | || || | |||| Sbjct 11557 TGTTCTGTCCCAACGAGGCACCTGGCCTCCACGAGGTTTGGGGTGACGAGTTC 11505 Score = 129 bits (142), Expect = 6e-25 Identities = 154/208 (74%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| |||||||||||||| | |||| || || || | | || ||| Sbjct 12147 TCATGCGTGTCGCCGTCGGCATCCATGGGGCCGACATCGAACGCGTTCTGCAAACGTACA 12088 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | |||||| || || |||| ||||| |||||||| ||||| Sbjct 12087 ACCTCATGTCCGAGCGTTACTTCACCCATGCATCGCCCACCCTCTTCAACGCTGGTACTC 12028 Query 19236 ACAACCCGCAGATGTCGAGCT---GTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGG 19292 |||||| |||||| |||| | ||||| || |||||||| || ||| |||| Sbjct 12027 CCAACCCTCAGATG---AGCTCATGCTTCCTCGTTTGCATGAAGGACGATTCCATAGAGG 11971 Query 19293 GCATCTACGAGACGCTCAAGGAGTGCGC 19320 | |||||||||||||||||||| ||||| Sbjct 11970 GTATCTACGAGACGCTCAAGGACTGCGC 11943 >seq13619 Length=8937 Score = 125 bits (138), Expect = 8e-24 Identities = 353/531 (66%), Gaps = 16/531 (3%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| ||||| || | ||| || ||| ||| |||||||| || || || || | Sbjct 119 TGTACAAGAAGGCCGAGGCTTCCTTTTGGACCGCGGAGGAGATGGATCTTTCCAAGGATC 178 Query 59653 TGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 | | |||||| |||| | |||| |||| |||| || |||||| ||||| | Sbjct 179 TCCACGATTGGCACAACCGTCTCAACGACGATGAGCGCCACTTCATCTCTCATGTCCTCG 238 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAAC--TTTTCCAA 59767 |||||||||| || ||||| ||||||| || || | | | |||| || ||||| Sbjct 239 CCTTCTTCGCCGCCTCAGATGGTATTGTGAACGAGAACCTCGTC--GAACGTTTCTCCAA 296 Query 59768 GGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTAT 59827 || |||||| || |||||||| | ||||||| | ||| | | ||| || Sbjct 297 CGAGGTCCAGGCCGCTGAGGCCCGCTGCTTCTACGGCTTCCAGATCATGATGGAGAACAT 356 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 ||||||||| || ||||| ||| | ||||| | | |||| || || | || | Sbjct 357 CCACTCCGAAACCTACTCCCTCCTCATCGACACCTACATCAAAGACCCCAAGCAGCGTGA 416 Query 59888 TGGTCTGTTCCGTGCCATAGAGA-CGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 || ||| ||| || || | | ||||| ||| | || | || || || ||||| Sbjct 417 GCACCTCTTCGATGCAATTGAAACCATCCCCTGCA-TCAAGAAGAAGGCCGACTGGGCAC 475 Query 59947 TGCAGTGGAT---GAGTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGC 60002 | | ||||| | | | |||| | | || || | || || | || || || Sbjct 476 TCCGCTGGATCTCGGATAC-GGAGTCTACTTTCGCGGAGCGCCTTGTCGCCTTCGCCGCG 534 Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGG 60061 || || || |||||||||||||| || || || | | || ||||||||||| ||||| || Sbjct 535 GTCGAGGGTATCTTCTTCTCTGGGTCCTT-TGCGTCAATCTTCTGGCTCAAGAAGCGCGG 593 Query 60062 CCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 | | ||||| || || | ||||| |||||||| || || || |||||||| Sbjct 594 CTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGTGACGAGGG 644 >seq13613 Length=18521 Score = 125 bits (138), Expect = 8e-24 Identities = 343/516 (66%), Gaps = 12/516 (2%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGAC---AAG 59669 ||||||||| | ||||| |||||||| || | ||||| || ||| || ||| Sbjct 17750 TCATTCTGGACAGTCGAAGAGATTGATCTTTCGCATGACCTTTTCGACTGGAACGGGAAG 17691 Query 59670 CTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 |||| || |||||| ||| ||| || || || ||||||||||| || || Sbjct 17690 CTCACAAACAACGAGCGGCACTTCCTCTCTTATGTGCTCGCCTTCTTCGCCGCCTCAGAC 17631 Query 59730 GGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAGGCC 59789 || ||||| | || ||| | | | | ||||| || || |||||| || ||||| Sbjct 17630 GGCATTGTCAACGAGAATCTGGTCGAGCGGTTTTCTAACGAGGTCCAGGCCGCTGAGGCA 17571 Query 59790 CGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCGCTC 59849 || | || |||| | |||| | | ||| | ||||| ||||| ||||| ||| Sbjct 17570 CGATGCTTTTACGGCTTTCAGATCATGATCGAAAACGTTCACTCGGAGACCTACTCTCTC 17511 Query 59850 ATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATAGAG 59909 | ||||||| | ||| ||||| || || | | || ||| || || || Sbjct 17510 CTCATCGATACTTATATCAGAGATCCCGACGAACGGACCTTCCTCTTCGACGCAATCGAA 17451 Query 59910 ACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATGAGTCCTGGAGC 59968 || | ||| | | | || | || || || ||||| ||| ||||| || || | Sbjct 17450 ACCATACCCTGTA-TCAAGAAGAAGGCCGACTGGGCATTGCGTTGGAT-AGCGGACGACC 17393 Query 59969 A-TCA---TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTG 60024 | || || || | || || | || ||||| |||||| || || |||||||||| Sbjct 17392 AGTCCGTGTTCGCTGAGCGACTGGTGGCGTTTGCGGCCGTGGAGGGCATATTCTTCTCTG 17333 Query 60025 GCTCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 | | ||| || | || ||||||||||| |||||||| |||||||| ||||||| ||| Sbjct 17332 GGT-GTTTTGCCTCCATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCCGGCCTGACGTTC 17274 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 || |||||||| || || || ||||||||| | ||| Sbjct 17273 TCAAACGAGCTCATATCGCGCGACGAGGGCATGCAT 17238 >seq15381 Length=32578 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 |||||| | || || ||| ||||| || || ||||||||| || || || || Sbjct 22750 CGTCTCGTCGCATTCGCAGCGGTGGAGGGCATATTCTTCTCTTTGTCCTTTGCGGCCATC 22691 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 ||||||||||| | || ||| | ||||| ||| || | ||| |||||| |||| || Sbjct 22690 TTCTGGCTCAAGAGCCGGGGCTTGATGCCCGGCTTGTGCCACTCTAACGAGTTGATCTCG 22631 Query 60102 CGGGACGAGGGCCTCCAT 60119 ||||||||||| |||||| Sbjct 22630 CGGGACGAGGGGCTCCAT 22613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548395190446320