Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq15036 122 1e-22 seq5406 114 1e-20 seq13613 107 2e-18 seq11149 96.9 4e-15 >seq15036 Length=18609 Score = 122 bits (134), Expect = 1e-22 Identities = 198/280 (71%), Gaps = 10/280 (4%) Strand=Plus/Minus Query 53179 GCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC--ACGCGT 53236 ||| || |||| ||||||| |||||| | || ||||| || | |||| | |||||| Sbjct 12161 GCCACAACATCTCCTCATGCGTGTCGCCGTCGGCATCCATGGGGCCGACATCGAACGCGT 12102 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTG 53296 || | | |||||| || | ||| | | ||||| || || || |||| ||||| Sbjct 12101 -TCTGCAA-ACGTACAACCTCATGTCCGAGCGTTACTTCACCCATGCATCGCCCACCCTC 12044 Query 53297 TTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAAG 53353 |||||||||||||| ||||||||||| |||| ||||||| || |||||| Sbjct 12043 TTCAACGCTGGTACTCCCAACCCTCAGATG---AGCTCATGCTTCCTCGTTTGCATGAAG 11987 Query 53354 GATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGG 53413 || || || || || || |||||||||||||||||||| || ||| ||| |||| Sbjct 11986 GACGATTCCATAGAGGGTATCTACGAGACGCTCAAGGACTGCGCCATGATCAGCAAGACA 11927 Query 53414 TCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGTGCGA 53453 | ||||| |||||| || || | ||| | ||||||| Sbjct 11926 GCCGGTGGCATCGGTCTCAACATCCATAACATTCGTGCGA 11887 Score = 116 bits (128), Expect = 4e-21 Identities = 202/291 (69%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||||| ||||||||||| || | | || ||| || ||||| || |||||||||| Sbjct 11795 GGCATCGTTCCTATGCTCCGTGTATACGACTCCACCGCGCGGTATGTGGACCAGGGTGGC 11736 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 || || || | ||||| |||||||||||||| ||||| |||||| | | ||| Sbjct 11735 AACAAACGTCCTGGTGCCTTCGCTATCTACCTCGAGCCATGGCATGCCGACGTGTTCGAG 11676 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TAC 53670 || |||| || || ||| || || | || ||| | ||| ||||||||| || ||| Sbjct 11675 TTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCCCGTGACCTCTTCTAC 11616 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730 || ||||||| || || || |||||| | || ||| || | | |||| || Sbjct 11615 -GCCTTGTGGATCCCCGATCTGTTCATGAAGCGCGTCGAGGCGGGTGGCAAATGGTCACT 11557 Query 53731 GATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTT 53781 | | || || |||||| || |||||||| | || | ||||| ||||| Sbjct 11556 GTTCTGTCCCAACGAGGCACCTGGCCTCCACGAGGTTTGGGGTGACGAGTT 11506 >seq5406 Length=1760 Score = 114 bits (126), Expect = 1e-20 Identities = 216/316 (68%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 152812 TCGGTCATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGACCCGTAGACCTTTCCA 152871 || ||||| | ||| |||||||| || ||||| | ||| | | ||| | | | Sbjct 866 TCCGTCATCAACATGAGACGACCATACCGCAG--CCCGTCGACGCTCGTGTAAGTCTTGT 809 Query 152872 TGT--TGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTT 152929 ||| || ||||| |||||||| |||| ||| | |||||||| | | | ||| | Sbjct 808 TGTGCTGCAGCCCTAGGATCTTCTTGATGTTCTGGATCTCCTCATTCTTCATGATCTGGT 749 Query 152930 TCACCGTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGT 152989 | | || || || || ||| || | ||||| || || || ||||||||| ||| || Sbjct 748 CGTGCTTCGCGTCGCGGACGTTGAGCAGTTTTCCGCGAAGCGGGAACACGCCGTACGTGT 689 Query 152990 TGCGGCCTACAACGCTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGA 153049 || || || || | ||| || || || || || || || || ||||||||||| |||| Sbjct 688 CACGACCGACCACACCCAGCCCAGCGATCGCGAGCGCCTTGGCGGAGTCACCCTCAGTGA 629 Query 153050 TAATAAGCGTACAGTCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109 || |||||||| |||| || | || |||||| ||||||||| |||||||| Sbjct 628 GGATGAGCGTACACTCGTCAGCTCTCCTAGAACCGGCTTTGTTGGCGTCACAAAGCTTGG 569 Query 153110 GGATTCCCGTGATCCT 153125 | || |||||||| Sbjct 568 TCAAGCCAGTGATCCT 553 Score = 86.0 bits (94), Expect = 7e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 118106 TGTTGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTCATTTTCCGTCACCTGTTTT 118165 || || ||||| |||||||| || | ||| | |||||||| | | | | ||| | Sbjct 806 TGCTGCAGCCCTAGGATCTTCTTGATGTTCTGGATCTCCTCATTCTTCATGATCTGGTCG 747 Query 118166 ATGGTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTGTCA 118225 | ||||| || |||||| || | || || || || || |||||||| || ||||| Sbjct 746 TGCTTCGCGTCGCGGACGTTGAGCAGTTTTCCGCGAAGCGGGAACACGCCGTACGTGTCA 687 Query 118226 CGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTAATA 118285 || || || || | || || || || || || ||||| || ||||||||||| || | Sbjct 686 CGACCGACCACACCCAGCCCAGCGATCGCGAGCGCCTTGGCGGAGTCACCCTCAGTGAGG 627 Query 118286 ATAAGAGTGCACTCG 118300 || || || |||||| Sbjct 626 ATGAGCGTACACTCG 612 >seq13613 Length=18521 Score = 107 bits (118), Expect = 2e-18 Identities = 318/484 (66%), Gaps = 10/484 (2%) Strand=Plus/Plus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || || |||| ||||| ||||| || ||||||||||| | ||| ||||||| Sbjct 17266 TCGTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCA 17325 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGA-- 74907 || | ||| |||||| ||||| || || |||||| || || || || | |||| Sbjct 17326 AAACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAAC 17385 Query 74908 ACGG--TGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGG 74965 |||| || ||| | |||||| | ||||| || || || |||| |||| Sbjct 17386 ACGGACTG-GTCGTCCGCTATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGA-TACAGG 17443 Query 74966 G-ACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGT 75024 | | || ||||| || | ||||||| | | || |||||||| ||| | | Sbjct 17444 GTATGGTTTCGATTGCGTCGAAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTAT 17503 Query 75025 CAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGA 75084 | || | || ||||| |||||||| |||| ||| | | ||| | |||| | Sbjct 17504 CGATGAGGAGAGAGTAGGTCTCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAA 17563 Query 75085 AAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGA 75144 | | || ||||| || ||| || || || ||||| | | | | |||||| ||| Sbjct 17564 AGCATCGTGCCTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGA 17623 Query 75145 CGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGT 75204 | |||||||| ||||||||||| || || || || || ||||| ||||| | || Sbjct 17624 CAATGCCGTCTGAGGCGGCGAAGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGT 17683 Query 75205 CAGTGAGTTT---GTCCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCC 75261 ||||| || || ||| || ||||| || | ||||||||| ||||| |||| Sbjct 17684 TTGTGAGCTTCCCGTTCCAGTCGAAAAGGTCATGCGAAAGATCAATCTCTTCGACTGTCC 17743 Query 75262 AGAA 75265 |||| Sbjct 17744 AGAA 17747 >seq11149 Length=8445 Score = 96.9 bits (106), Expect = 4e-15 Identities = 174/250 (70%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 124593 TGCCCCCAGTCGCGCTTGGCATCCAGGTTTCCGAGCTCGATTGGCTTGGCCG--TCTTGT 124650 || |||||||| ||||| || || ||||| ||||| | || ||| || | ||||| Sbjct 7003 TGTCCCCAGTCACGCTTCGCGTCGAGGTTCCCGAGGTAGA--GGCAATGCTGCTTCTTGA 7060 Query 124651 --TCCAC-TCCGCCAAACCCAGTGTAATCTTGCGCGTCACAAACTCGGAACCGCGTCGCT 124707 | | ||||| | | | || |||||||| || || ||| | || || || Sbjct 7061 GGTGTATGTCCGCGACCGCGCGCGTGATCTTGCGGGTGACGAACGTGCGCCCACGGCGGG 7120 Query 124708 CAGACTCGTGGTTGAACAGAATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGT 124767 |||||||||||||| || ||||| | ||||| |||| ||||||| |||||| |||| Sbjct 7121 GCGACTCGTGGTTGAAGAGGATGCCGTTGCACGCGTACATGCCGTACGCCTCGCGATAGT 7180 Query 124768 TTTTCGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATG 124827 | ||||||||| ||||| | | ||| | |||||||| || || |||||||| | Sbjct 7181 TGACCGTCATCCAGAACCCATACAACTTCGCGACGCCATACGGCGAGCGAGGGTAGAACG 7240 Query 124828 GGGTGTTTTC 124837 | || || || Sbjct 7241 GCGTCTTCTC 7250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547086699699400