Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6477 181 1e-40 seq10137 158 1e-33 seq13619 102 9e-17 seq6470 93.3 5e-14 seq5406 93.3 5e-14 seq17864 89.7 6e-13 seq10154 84.2 2e-11 >seq6477 Length=89905 Score = 181 bits (200), Expect = 1e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||||||||||||||| || || || | ||||| ||||| Sbjct 7212 AATGCAGATTTTCGTGAAGACGCTTACCGGCAAAACGATCACATTGGAGGTGGAGTCTTC 7271 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | ||| ||||||| || ||||||||||||||||| ||||| || ||||| Sbjct 7272 GGATACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCGCCTGACCA 7331 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || || || || |||||||| ||||| | ||||||| ||||||||| | || || || Sbjct 7332 ACAACGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTACAA 7391 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| || ||||||||||| ||||| || Sbjct 7392 CATTCAGAAGGAGTCGACGCTTCACCTTGTCTTGCGTCTGCGCGGAGG 7439 Score = 159 bits (176), Expect = 4e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||| | ||||| ||||| || ||||| ||||| ||||| Sbjct 6932 ATGCAAATCTTCGTGAAGACGTTGACCGGAAAGACGATCACTCTCGAGGTCGAGTCTTCG 6991 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||| ||||||||||| || ||||| |||||| Sbjct 6992 GACACTATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGGATCCCTCCCGACCAG 7051 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| ||| ||| | | |||||||| Sbjct 7052 CAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTATAAC 7111 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 |||| ||||| ||||| ||||| || Sbjct 7112 ATCCAGAAGGAGTCCACCCTTCACCT 7137 Score = 138 bits (152), Expect = 1e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 7441 ATGCAAATTTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCCTCG 7500 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||||| || ||||||||||||||||| ||||| || || ||| Sbjct 7501 GACACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGGATTCCGCCTGATCAG 7560 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| | ||||| | ||||| || | ||||| || Sbjct 7561 CAGCGCCTGATCTTCGCTGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAAC 7620 Query 27586 GTCCAAAAGGA 27596 |||| ||||| Sbjct 7621 ATCCAGAAGGA 7631 Score = 120 bits (132), Expect = 3e-22 Identities = 163/227 (72%), Gaps = 14/227 (6%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || || |||||||| || || ||||| ||||| Sbjct 6718 ATGCAGATCTTCGTCAAGACCCTCACGGG-AAGACTATCACCCTCGAGGTGGAGTCGTCC 6776 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| |||||||||||||||||||| || || || |||||| Sbjct 6777 GACACTATCGATAACGTCAAGGCGAAAATTCAGGACAAGGAGGGCATCCCGCCTGACCAG 6836 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || |||||||| | ||| || || | ||||| || Sbjct 6837 CAGCGTCTTATCTTTGCCGG-------CTCGAGGACGGTCGCACTCTCTCCGACTACAAC 6889 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || || ||| | |||||||| || || Sbjct 6890 ATTCAGAAGGA------GCTGCACCTCGTCCTTCGTCTTCGGGGCGG 6930 >seq10137 Length=11321 Score = 158 bits (174), Expect = 1e-33 Identities = 155/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| | ||||||||||| || || || ||||| ||||| Sbjct 3504 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCC 3445 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || |||||||||||||| || ||||| |||||| Sbjct 3444 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 3385 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| |||||||| || ||||| | ||||| || | ||||| ||| Sbjct 3384 CAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGCCGTACTCTTTCGGACTACAAT 3325 Query 27586 GTCCAAAAGGAATCCACTCT 27605 |||| ||||| |||||||| Sbjct 3324 ATCCAGAAGGAGTCCACTCT 3305 Score = 145 bits (160), Expect = 9e-30 Identities = 158/209 (76%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGA---CTATTACTCTTGAGGTTGAGTCA 27462 ||||| ||||||||||||||| | || || |||| |||| || || ||||| ||||| Sbjct 3218 ATGCAGATCTTTGTCAAGACGTTGACGGGTAAGAAGACTATCACCCTCGAGGTGGAGTCT 3159 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | || | || | ||||| || ||||||||||||||||| || || || ||| Sbjct 3158 TCGGACACGATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGAC 3099 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || || ||||||||||| |||||||||| ||| ||||| | ||||| Sbjct 3098 CAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGTCCGACTAC 3039 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCT 27611 || | || ||||| ||| |||||||| Sbjct 3038 AACATTCAGAAGGAGAGCACGCTTCATCT 3010 Score = 140 bits (154), Expect = 4e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| || || | ||||| ||||| Sbjct 2928 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCTTGGAGGTCGAGTCGTCG 2869 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||||| || || |||||||||||||| ||||| || |||||| Sbjct 2868 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCGCCCGACCAG 2809 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || ||||||| || || || | || || || Sbjct 2808 CAGCGTCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGGCGCACGCTCTCTGATTACAAC 2749 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||| || || || || | ||||| || ||||| Sbjct 2748 ATCCAGAAGGAGAGCACCCTCCACCTTGTGCTCCGTCTCCGTGGTGG 2702 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||||| Sbjct 3839 ATGCAGATCTTCGTTAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 3780 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||||| || | ||||| || || |||||||||||||| Sbjct 3779 GATACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 3736 >seq13619 Length=8937 Score = 102 bits (112), Expect = 9e-17 Identities = 164/233 (70%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 64663 AAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCGT 64719 || ||||| || ||||| |||| ||||| | || | ||| | || | |||| Sbjct 457 AAGAAGGCCGACTGGGCACTCCGCTGGATCTCGGATACGGAGTCTACTTTCGCGGAGCGC 516 Query 64720 CTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTC 64779 || | || || ||| || || || || ||||| |||||||| || || || ||| Sbjct 517 CTTGTCGCCTTCGCCGCGGTCGAGGGTATCTTCTTCTCTGGGTCCTTTGCGTCAATCTTC 576 Query 64780 TGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGG 64839 ||||| || ||||| ||| ||||||| ||||| |||| ||||||||||| ||||| || Sbjct 577 TGGCTCAAGAAGCGCGGCTTGATGCCCGGTCTCACGTTCTCGAACGAGCTCATCTCGCGT 636 Query 64840 GACGAGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCAGCCACCTCAAG 64890 |||||||| | ||| || || || | || || |||||||| |||||| Sbjct 637 GACGAGGGTATGCACACCGACTTCGCATGCTT--GCTCTTCAGCCATCTCAAG 687 >seq6470 Length=2367 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| ||||| || ||||| || || |||||||| ||||| Sbjct 1290 ATGCAAATCTTCGTCAAGACCCTTACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 1231 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | ||||| || ||||||||||||||||| Sbjct 1230 GACACCATCGACAATGTTAAGGCCAAGATTCAGGACAAGGAGGG 1187 >seq5406 Length=1760 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 31250 ACGAGTGCACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCT 31309 ||||||| ||||| || | || ||||||||||| || |||||||| || || ||||| Sbjct 611 ACGAGTGTACGCTCATCCTCACTGAGGGTGACTCCGCCAAGGCGCTCGCGATCGCTGGGC 670 Query 31310 TGAGTGTTGTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACG 31369 || |||| || || || | ||| ||| ||||| ||||| || || || | || |||| Sbjct 671 TGGGTGTGGTCGGTCGTGACACGTACGGCGTGTTCCCGCTTCGCGGAAAACTGCTCAACG 730 Query 31370 TTCGTGACGCCTCCGTTAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGA 31429 | || ||||| | ||| | | | | ||||| ||| | ||| | || |||| Sbjct 731 TCCGCGACGCGAAGCACGACCAGATCATGAAGAATGAGGAGATCCAGAACATCAAGAAGA 790 Query 31430 TCCTCGGGCTTCAGCA 31445 |||| ||||| ||||| Sbjct 791 TCCTAGGGCTGCAGCA 806 >seq17864 Length=12555 Score = 89.7 bits (98), Expect = 6e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27492 AATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCA 27551 ||| ||||||||||||||||| || || |||||||| || | || |||||||| ||||| Sbjct 12371 AATCCAGGACAAGGAGGGAATCCCGCCCGACCAGCAACGGTTTATCTTTGCTGGAAAGCA 12430 Query 27552 ACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCT 27611 ||||| || | || || || ||||| || || | ||| | ||| || || || Sbjct 12431 GCTCGAAGACGGCCGCACTCTCCGCGACTACAACATCGGGAGGGAGTGCACACTCCACCT 12490 Query 27612 AGTCTTGCGTCTTCGCGGTGGA 27633 || ||||||||||||| ||| Sbjct 12491 TGTGCTGCGTCTTCGCGGCGGA 12512 >seq10154 Length=2859 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||||||||| || || || ||||| ||||| Sbjct 229 ATGCAGATCTTCGTTAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 170 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||||| || | ||||| || || |||||||||||||| Sbjct 169 GATACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570175642781360