Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6477 109 5e-19 seq10137 98.7 9e-16 >seq6477 Length=89905 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || |||||||| | || || | || ||||| | || Sbjct 7213 ATGCAGATTTTCGTGAAGACGCTTACCGGCAAAACGATCACATTGGAGGTGGAGTCTTCG 7272 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || ||||| ||||| || ||||| || || || ||| Sbjct 7273 GATACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCGCCTGACCAA 7332 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || | || | || || || || ||||| || || ||| |||| ||||||||| Sbjct 7333 CAACGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTACAAC 7392 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| ||||||||||| | || | || |||||| |||| || ||||| Sbjct 7393 ATTCAGAAGGAGTCGACGCTTCACCTTGTCTTGCGTCTGCGCGGAGGCAT 7442 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/193 (71%), Gaps = 8/193 (4%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || || ||| |||| || || || ||||| |||| Sbjct 6717 CATGCAGATCTTCGTCAAGACCCTCACGGG-AAGACTATCACCCTCGAGGTGGAGTCGTC 6775 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| | || || | ||||| |||||||| ||||| || ||||| || || || || Sbjct 6776 CGACACTATCGATAACGTCAAGGCGAAAATTCAGGACAAGGAGGGCATCCCGCCTGACCA 6835 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | |||||| | || ||| || || | ||||| ||||| Sbjct 6836 GCAGCGTCTTATCTTTGCCGGC-------TCGAGGACGGTCGCACTCTCTCCGACTACAA 6888 Query 27167 CATTCAAAAGGAG 27179 |||||| |||||| Sbjct 6889 CATTCAGAAGGAG 6901 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||||| ||| | || ||||| || || || | || Sbjct 6932 ATGCAAATCTTCGTGAAGACGTTGACCGGAAAGACGATCACTCTCGAGGTCGAGTCTTCG 6991 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || || || ||||||||||| || || || || ||||| || Sbjct 6992 GACACTATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGGATCCCTCCCGACCAG 7051 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||| || || | || || || ||| | ||||| || ||| Sbjct 7052 CAGCGTCTCATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTATAAC 7111 Query 27168 ATTCAAAAGGAGTCGACC 27185 || || |||||||| ||| Sbjct 7112 ATCCAGAAGGAGTCCACC 7129 >seq10137 Length=11321 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || || || ||||| | ||| Sbjct 3504 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCC 3445 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || ||||| || ||||| || Sbjct 3444 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 3385 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||| || || |||| ||| | || |||| || ||||| Sbjct 3384 CAGCGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGCCGTACTCTTTCGGACTACAAT 3325 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 3324 ATCCAGAAGGAGTCCAC 3308 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/195 (70%), Gaps = 3/195 (2%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGT---CTATTACTCTTGAAGTGGAACCG 27044 |||||||| ||||| || || |||| || ||| |||| || || || ||||| | Sbjct 3218 ATGCAGATCTTTGTCAAGACGTTGACGGGTAAGAAGACTATCACCCTCGAGGTGGAGTCT 3159 Query 27045 TCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGAT 27104 || ||| |||| || | ||||| || ||||| ||||| || || || || || || Sbjct 3158 TCGGACACGATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGAC 3099 Query 27105 CAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTAC 27164 || ||||| || || | ||| || || || | || || || ||| | ||||| ||| Sbjct 3098 CAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTCGAGGATGGTCGCACCCTGTCCGACTAC 3039 Query 27165 AACATTCAAAAGGAG 27179 |||||||| |||||| Sbjct 3038 AACATTCAGAAGGAG 3024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434815634218560