Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq6477 174 4e-38 seq10137 167 5e-36 seq10154 89.7 1e-12 seq17864 84.2 5e-11 seq6470 84.2 5e-11 >seq6477 Length=89905 Score = 174 bits (192), Expect = 4e-38 Identities = 165/211 (78%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 |||||||||||| || ||||| || || ||||| ||||||| |||||| | ||||| || Sbjct 7422 GACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATCCTC 7363 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024 || |||||| || || ||||| ||||||||||||||||| |||| || ||||||||||| Sbjct 7362 CAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTCCTG 7303 Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084 ||||| ||||| || |||||||| || || || ||||| | |||||||| || Sbjct 7302 AATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGTTTT 7243 Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || ||||| || || | ||||||| Sbjct 7242 GCCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 |||||||| |||||||| || ||||||||||| || | | ||| | ||||| || ||| Sbjct 7137 AGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGC 7078 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || |||||||| || || || ||||| ||||| | || |||||||| || ||| Sbjct 7077 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATC 7018 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || ||||| ||||| ||||| || || ||||||||||||||||||||||| Sbjct 7017 TTCGCCTTAACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCG 6958 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || | ||||| || || | ||||| Sbjct 6957 GTCAACGTCTTCACGAAGATTTGCAT 6932 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 ||||| || ||| ||| || |||||||| || || | || || | || || |||| | Sbjct 7646 AGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAAC 7587 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || |||||||| ||||| || || ||||| |||| || ||||||||||| ||| Sbjct 7586 TGCTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCCTGAATC 7527 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || ||||| || ||||| ||||| ||| |||||||| || ||||||||||| ||| Sbjct 7526 TTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACCC 7467 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| | ||||| Sbjct 7466 GTGAGGGTCTTCACAAAAATTTGCAT 7441 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| ||||||||||| || ||||| || ||||||| || || | ||| || Sbjct 6701 AGGACAAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGAGAGTGTGCGTCCGTCC 6642 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||||||||||||||| | ||| || ||||| ||||| Sbjct 6641 TCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGAGG 6598 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| |||||||| || ||||| ||||||||||| ||| ||| |||||| Sbjct 6523 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCG 6464 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| |||||||| ||||||||||| || || | |||||| Sbjct 6463 AGCGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAGATCTGCAT 6420 Score = 102 bits (112), Expect = 2e-16 Identities = 108/141 (77%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 210974 GCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTG 211033 ||| || |||||||| || || |||||||| || | || ||||||||||| || || Sbjct 6857 GCCGGCAAAGATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGC 6798 Query 211034 TTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAG 211093 || ||||| ||||| ||||| || || |||||||| ||||| ||| |||||||||| Sbjct 6797 CTTGACGTTATCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTC-TTCCCGTGAG 6739 Query 211094 AGTCTTTACAAACACCTGCAT 211114 ||||| || || | |||||| Sbjct 6738 GGTCTTGACGAAGATCTGCAT 6718 >seq10137 Length=11321 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||| || ||| ||| || |||||||| ||||| | || || | ||||| Sbjct 2717 AGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCC 2776 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| || |||| || ||||||||| Sbjct 2777 TCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCC 2836 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| || || ||||| | ||||||||| Sbjct 2837 TGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTC 2896 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || |||||||| ||||| || || | |||||| Sbjct 2897 TTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 159 bits (176), Expect = 8e-34 Identities = 161/208 (77%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||| || |||||||||| || ||||| || || |||| ||| || | || || |||| Sbjct 3298 CAAGGGGA-GAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCA 3356 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || || |||||||| || || ||||| ||||| | || ||||||||||||| Sbjct 3357 GCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGA 3416 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| ||||||||||| ||| || |||||||| ||||| ||||| | Sbjct 3417 TCTTCGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGC 3476 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| || || | |||||| Sbjct 3477 CGGTCAAGGTCTTCACGAAGATCTGCAT 3504 Score = 136 bits (150), Expect = 9e-27 Identities = 157/211 (74%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||| ||||| ||| ||| || || ||||| || || | ||||| | ||||| || | Sbjct 3008 CAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGA 3067 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| | ||| || |||||||| || | || ||||||||||| | Sbjct 3068 GCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGAA 3127 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGA---TCGTCT 211083 |||| || ||||| ||||| ||||| || || |||||||| |||| || ||| Sbjct 3128 TCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCT 3187 Query 211084 TTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| | ||||| ||||| | |||||| Sbjct 3188 TACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| || ||||| || ||| || |||||| Sbjct 3736 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCG 3795 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||||||||| || || | |||||| Sbjct 3796 AGGGTGATGGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCAT 3839 >seq10154 Length=2859 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| || ||||| || ||| || |||||| Sbjct 126 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCG 185 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||||||||| || || | |||||| Sbjct 186 AGGGTGATGGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCAT 229 >seq17864 Length=12555 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || |||||||| || ||| |||| | |||||| || || || || Sbjct 12505 CGAAGACGCAGCACAAGGTGGAGTGTGCACTCCCTCCCGATGTTGTAGTCGCGGAGAGTG 12446 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||| |||||||| || || ||||||| ||||| ||||| || || | ||| Sbjct 12445 CGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAACCGTTGCTGGTCGGGCGGGATTCCC 12386 Query 211014 TCCTTGTCCTGGAT 211027 |||||||||||||| Sbjct 12385 TCCTTGTCCTGGAT 12372 >seq6470 Length=2367 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || |||||||||||||| ||||| || |||||||| || || || || | ||||| Sbjct 1024 AGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTACGGCCATCC 1083 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| ||||| || || || || || |||||||| Sbjct 1084 TCGAGCTGCTTGCCGGCGAAAATCAGCCGCTGCTGATCAGGAGG 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158871259543595