Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq10137 102 7e-17 >seq10137 Length=11321 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| | || ||| ||| || || ||||| || || | ||| || || |||| || Sbjct 3296 ACCAAGGGGAGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCC 3355 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| || || ||||| ||||||||||||||||||| || | || ||| |||||| | Sbjct 3356 AGCTGCTTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 3415 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || ||| |||| ||| | | | || ||| |||||||| || | ||||| | || Sbjct 3416 ATCTTCGCCTTGA-CGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTT 3474 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| || || || ||||| ||||| Sbjct 3475 GCCGGTCAAGGTCTTCACGAAGATCTGCAT 3504 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/214 (71%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 39076 ACCAA-ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| ||| ||||||||||| || || || || || |||| || || || | || || Sbjct 3006 ACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTC 3065 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| || || || || || | ||||||||||| | ||| | | ||| |||||| Sbjct 3066 GAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTG 3125 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATA--CT 39251 || ||| |||| ||| | | | ||| || |||||||| || | |||||| || Sbjct 3126 AATCTTCGCCTTGA-CGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCT 3184 Query 39252 T-TTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || ||||||| ||| || |||||||| ||||| Sbjct 3185 TCTTACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| || || || || ||||| | || || || | || |||||||| Sbjct 2726 TGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCGCCCATCCTCAAGCTGC 2785 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 |||||||| || || |||||||||||||||| || | | ||| |||||| ||| ||| Sbjct 2786 TTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTCCTTGTCCTGGATCTTC 2845 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | || || |||||| || |||| ||||| | || ||||| Sbjct 2846 GCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGTGATCGTCTTCCCCGTG 2905 Query 39262 AGCGTTTTAACAAAGATTTGCATC 39285 || || || || || || |||||| Sbjct 2906 AGGGTCTTGACGAAAATCTGCATC 2929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429446641150439