Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq17681 152 4e-32 >seq17681 Length=5155 Score = 152 bits (168), Expect = 4e-32 Identities = 221/307 (72%), Gaps = 10/307 (3%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GAGG-T 27439 ||||||||| || | | ||||||||| | |||| |||| || | |||| | || | Sbjct 3355 GGGGTTCCAAGCACTGAGGATGATGCGACGGTCTGTGGGGTCGTGCTTGATCTTGCGGAT 3296 Query 27440 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTG 27498 ||| | || |||||||| || ||| | || ||||||||| | | || |||| | Sbjct 3295 GCACTCC----TGAAGCTGATCGACGCCCTTTCCAGAGTAGTCTGCGTCGCA-GTCCTCG 3241 Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 |||| |||||||||||| | ||||||||| ||||| || || || ||||| || || Sbjct 3240 TACTTTGCTCCGAAATGGCGCCATTGGAAACCGTAGACGGGGCCAAGGTCACCTTCGCGT 3181 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 | || ||| ||| | ||| || | || || |||| |||||| ||||||||||||| Sbjct 3180 CGATGACCGAGGCCGCGCTTCTCGAGGAACTCCTTGGAGCCGTTGCCGTCCCAGATCTTG 3121 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 | ||||| |||||||| ||||||| |||||| || | | ||||| || |||||| Sbjct 3120 ATGCCCTTTTCGGAGAGGAGCTTGGAGTCTGTGGAACCGCGTATAAACCAGAGAAGCTCC 3061 Query 27679 TCCACGA 27685 || |||| Sbjct 3060 TCGACGA 3054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369422072815793