Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13613 149 9e-31 >seq13613 Length=18521 Score = 149 bits (164), Expect = 9e-31 Identities = 344/517 (67%), Gaps = 10/517 (2%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || || || || ||||| || |||||||| |||||||| || || | || Sbjct 17266 TCGTTTGAGAACGTCAGGCCGGGCATGAGCCCACGCTTCTTGAGCCAGAAGATGGAGGCA 17325 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTA- 46790 ||| | ||||| ||||||||||| || || ||||| || || || |||| ||| || | Sbjct 17326 AAACACCCAGAGAAGAATATGCCCTCCACGGCCGCAAACGCCACCAGTCGCTCAGCGAAC 17385 Query 46791 ----ACTGGCATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAG 46846 ||||| || | ||||| | ||||| || ||||| ||||| | ||| | Sbjct 17386 ACGGACTGG--TCGTCCGCTATCCAACGCAATGCCCAGTCGGCCTTCTTCTTGATACAGG 17443 Query 46847 GCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTAT 46906 | || ||||| || || | ||||| ||| | ||| || |||| | | ||| |||| Sbjct 17444 GTATGGTTTCGATTGCGTCGAAGAGGAAGGTCCGTTCGTCGGGATCTCTGATATAAGTAT 17503 Query 46907 CTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAA 46966 | || | ||| || | || || |||| |||||| || |||||||| ||||||| Sbjct 17504 CGATGAGGAGAGAGTAGGTCTCCGAGTGAACGTTTTCGATCATGATCTGAAAGCCGTAAA 17563 Query 46967 AACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCA 47026 | |||| ||| |||| ||| ||||| || |||| || || || |||||| || | Sbjct 17564 AGCATCGTGCCTCAGCGGCCTGGACCTCGTTAGAAAACCGCTCGACCAGATTCTCGTTGA 17623 Query 47027 CTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGG 47086 | || || || || || || || || | |||| | || | || | | Sbjct 17624 CAATGCCGTCTGAGGCGGCGAAGAAGGCGAGCACATAAGAGAGGAAGTGCCGCTCGTTGT 17683 Query 47087 TAGTCAGTTT---ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCC 47143 | || || || |||||||| | || | || | ||| | ||||| |||||| Sbjct 17684 TTGTGAGCTTCCCGTTCCAGTCGAAAAGGTCATGCGAAAGATCAATCTCTTCGACTGTCC 17743 Query 47144 AGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 |||||||||||| || ||| ||||| | |||||| Sbjct 17744 AGAATGACGCCTGGGCCCGTTTGTACATTTGCCATAT 17780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712765942512960