Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6477 111 4e-19 seq10137 98.7 2e-15 >seq6477 Length=89905 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 || ||||| || ||||| || |||||||| || |||| || || | ||||| || || Sbjct 7137 AGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGC 7078 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||||||||||||| || | ||||||||| | | ||| || ||||| |||||||| Sbjct 7077 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATC 7018 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || || | || | |||| ||| ||| || || ||||| || || || || Sbjct 7017 TTCGCCTTAACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCG 6958 Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104 || | ||||||||||||| ||||| Sbjct 6957 GTCAACGTCTTCACGAAGATTTGCAT 6932 Score = 96.9 bits (106), Expect = 8e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 |||||| ||||| || ||||| || || ||||||||||| | | || | ||||| || Sbjct 7422 GACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAAAGGGTACGACCATCCTC 7363 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || ||||| || | || ||||| | || || || ||||| || || Sbjct 7362 CAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGAATGCCCTCCTTGTCCTG 7303 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || || ||| | || | | | || ||| ||| || || | || || ||||| Sbjct 7302 AATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACCTCCAATGTGATCGTTTT 7243 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || || ||||||||||| | ||||||| Sbjct 7242 GCCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 >seq10137 Length=11321 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || || || ||| || |||||||||||||| | | || | Sbjct 2710 GAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGCGTGCG 2769 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||| || || || || |||||||| || | ||||||||| | || || || || Sbjct 2770 CCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGAATACCCTC 2829 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | | |||| || ||| || || | || Sbjct 2830 CTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCCAAGGT 2889 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||| ||||| ||||| | |||||| Sbjct 2890 GATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 ||||| ||||| || ||||| ||||| || | | ||| | || || || || || Sbjct 3305 AGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTA 3364 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 ||||| |||||||| | ||||||||| | | ||| || ||||| || || || || Sbjct 3365 CCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCC 3424 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 ||||| | || | | |||| || ||| || || || || || || ||||| || | Sbjct 3425 TTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAG 3484 Query 152085 GTCTTCACGAAGACCTGCAT 152104 ||||||||||||| |||||| Sbjct 3485 GTCTTCACGAAGATCTGCAT 3504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153541350731913