Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq10137 187 5e-42 seq6477 178 3e-39 seq10154 98.7 2e-15 seq13655 96.9 7e-15 seq13619 95.1 3e-14 seq6470 89.7 1e-12 >seq10137 Length=11321 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||||| || || ||||||||||| |||| Sbjct 2701 ACCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGA 2760 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| || || || || || ||||| | ||| || ||||| ||| Sbjct 2761 GAGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGG 2820 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||| |||||||| || || || | ||||| |||||||| | ||||| Sbjct 2821 AATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGAC 2880 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 2881 CTCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 174 bits (192), Expect = 3e-38 Identities = 168/214 (79%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| |||| | |||||| || || || ||||||||||| | || ||||| ||||||| Sbjct 3005 TACCAAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCT 3064 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | || || || || || |||||||| || || |||||| || |||||||||||||| | Sbjct 3065 CGAGCTGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCT 3124 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGA---TCG 283065 | ||||| || || ||| | ||||| |||||||||| || || ||||| |||| || Sbjct 3125 GAATCTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCT 3184 Query 283066 TCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||||| ||||| || || |||||||| Sbjct 3185 TCTTACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 156 bits (172), Expect = 9e-33 Identities = 149/191 (78%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||| |||||||| | ||| || ||||| ||||| || || || ||||||||| Sbjct 3314 TCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTACCGGCAAAG 3373 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| || ||||| || || ||||||||||| |||||||| || || ||| | Sbjct 3374 ATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 3433 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| || | || || ||||| ||||| ||||| || ||||| ||||| ||| Sbjct 3434 TCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACG 3493 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 3494 AAGATCTGCAT 3504 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | || || || ||||| | ||||| ||| Sbjct 3736 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCG 3795 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | |||||||||||| |||||||| Sbjct 3796 AGGGTGATGGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCAT 3839 >seq6477 Length=89905 Score = 178 bits (196), Expect = 3e-39 Identities = 156/192 (81%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 || || |||||||| ||||| | |||| ||||| |||||||| || || |||||||| || Sbjct 7122 TCCTTCTGGATGTTATAGTCGGACAAG-GTGCGACCATCCTCAAGCTGCTTCCCGGCGAA 7064 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||| | ||| || ||||| || || |||||||||||||| ||||| || || ||| | Sbjct 7063 GATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGTCTTGAATCTTCGCCTTAACGTT 7004 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 |||||||||||||||| ||||| ||||||||||||||||| || ||||| ||||| || Sbjct 7003 GTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCCGGTCAACGTCTTCAC 6944 Query 283088 GAATATCTGCAT 283099 ||| || ||||| Sbjct 6943 GAAGATTTGCAT 6932 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| || | || || || | ||| || || || |||||||| || | | Sbjct 7439 CCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGAA 7380 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| | || ||||| |||||||||| |||||||||||| |||| Sbjct 7379 AGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGGA 7320 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || || | ||||| || ||||||| || || Sbjct 7319 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCACC 7260 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 || | |||||||| || || || | ||||| ||||| ||||||||| Sbjct 7259 TCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCATT 7212 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 282889 GTACC-AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 ||||| || || | ||||| || || |||||||||||||| | ||||| || || ||| Sbjct 7652 GTACCGAGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCC 7593 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || | || ||||| || ||||||| || || || ||| |||||| ||||||||||| Sbjct 7592 TCCAACTGCTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCC 7533 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 || ||||| || || || | ||||| |||||||| | || || || || ||||||||| Sbjct 7532 TGAATCTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTC 7473 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| | ||||| || || || ||||| Sbjct 7472 TTACCCGTGAGGGTCTTCACAAAAATTTGCAT 7441 Score = 136 bits (150), Expect = 8e-27 Identities = 145/191 (76%), Gaps = 8/191 (4%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||| | || ||||| || ||||| || ||||||||| Sbjct 6900 TCCTTCTGAATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAG-------CCGGCAAAG 6848 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | ||| || |||||| ||| || ||||||||||| || || || || || ||| || Sbjct 6847 ATAAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGAATTTTCGCCTTGACGTTA 6788 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||||||||| || | || || ||||| ||||| ||||| ||||| | ||||| ||| Sbjct 6787 TCGATAGTGTCGGACGACTCCACCTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGACG 6729 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 6728 AAGATCTGCAT 6718 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 |||||||||||||||||||| || || ||| | ||||| ||||| || | |||||| ||| Sbjct 6523 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGATTCGACCTCG 6464 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 6463 AGCGTGATGGTCTTTCCAGTGAGAGTCTTCACGAAGATCTGCAT 6420 >seq10154 Length=2859 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | || || || ||||| | ||||| ||| Sbjct 126 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCG 185 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | |||||||||||| |||||||| Sbjct 186 AGGGTGATGGTCTTGCCGGTGAGAGTCTTAACGAAGATCTGCAT 229 >seq13655 Length=683 Score = 96.9 bits (106), Expect = 7e-15 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| | | |||||| | ||||| ||||| ||||| || |||||| | Sbjct 9 CTCATCGGCATGAACTCYAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGATCGTCTA 68 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| ||||| || | || || || | || |||||||||| || ||||| Sbjct 69 CTCGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTCATGGAC 128 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTC 230387 | || || |||||||| || || ||||||||||| ||||| ||| Sbjct 129 ATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTC 173 >seq13619 Length=8937 Score = 95.1 bits (104), Expect = 3e-14 Identities = 120/165 (73%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||| | | |||||| | ||||| ||||| ||||| || |||||| | Sbjct 833 CTCATCGGCATGAACTCCAAGCTCATGTGCCAATACATCGAGTTCGTCGCCGATCGTCTA 892 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| ||||| || | || || || | || |||||||||| || ||||| Sbjct 893 CTCGTCGCGCTTGGCGATGACAAGCACTACGGCGTCACCAACCCCTTCGACTTCATGGAC 952 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTC 230387 | || || |||||||| || || ||||||||||| ||||| ||| Sbjct 953 ATGATCTCGCTCCAGGGAAAGACCAACTTCTTCGAGAAGCGCGTC 997 >seq6470 Length=2367 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| || ||||| || || || | ||||| ||||| |||| || || || Sbjct 1187 CCCTCCTTGTCCTGAATCTTGGCCTTAACATTGTCGATGGTGTCGGAAGACTCCACCTCA 1246 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCA 283104 || ||||||||||| ||||| | ||||| ||||| || ||||| |||| Sbjct 1247 AGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAGATTTGCATCTTCA 1295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046485685326562