Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq10137 149 2e-30 seq6477 149 2e-30 seq17864 87.8 4e-12 >seq10137 Length=11321 Score = 149 bits (164), Expect = 2e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || | || || || || ||||||||||||||||| ||| ||| Sbjct 3501 CAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCCTCCGAC 3442 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 3441 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAG 3382 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| ||||| || ||||| || || || | |||||| | || || || || Sbjct 3381 CGTCTTATCTTTGCCGGTAAGCAGCTGGAGGACGGCCGTACTCTTTCGGACTACAATATC 3322 Query 178104 CAAAAAGAATCAACACT 178120 || || || || || || Sbjct 3321 CAGAAGGAGTCCACTCT 3305 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||| | ||||| || || ||| Sbjct 2925 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCTTGGAGGTCGAGTCGTCGGAC 2866 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| || || || || || |||||||| Sbjct 2865 ACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATTCCGCCCGACCAGCAG 2806 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || | ||||| ||| || Sbjct 2805 CGTCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGGCGCACGCTCTCTGATTACAACATC 2746 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| Sbjct 2745 CAGAAGGAGAGCACCCTCCACCTTGT 2720 Score = 123 bits (136), Expect = 6e-23 Identities = 134/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 177951 AAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATT 178010 || || ||||||||||||||||| || ||||| ||||| |||||||| |||||| Sbjct 3185 AAGACTATCACCCTCGAGGTGGAGTCTTCGGACACGATCGACAACGTCAAGGCGAAGATT 3126 Query 178011 CAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTC 178070 |||||||| || || ||||| || |||||||| || | |||||||| || || |||||| Sbjct 3125 CAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCTTGATCTTCGCTGGTAAGCAGCTC 3066 Query 178071 GAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||||| | || || |||| || ||| | || || || || || ||||||| Sbjct 3065 GAGGATGGTCGCACCCTGTCCGACTACAACATTCAGAAGGAGAGCACGCTTCATCTTG 3008 >seq6477 Length=89905 Score = 149 bits (164), Expect = 2e-30 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || | || ||||| |||||||| |||||||| || || ||| Sbjct 6935 CAAATCTTCGTGAAGACGTTGACCGGAAAGACGATCACTCTCGAGGTCGAGTCTTCGGAC 6994 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||| ||||| || || |||||||| |||||||| Sbjct 6995 ACTATCGACAACGTTAAGGCGAAGATTCAAGACAAGGAGGGGATCCCTCCCGACCAGCAG 7054 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || ||||||||||| || ||||| || ||||| | || |||| |||| |||||| | Sbjct 7055 CGTCTCATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGCAC-CTTGTCCGACTATAACAT 7113 Query 178103 CCAAAAAGAATCAACACTGCATCT 178126 ||| || || || || || || || Sbjct 7114 CCAGAAGGAGTCCACCCTTCACCT 7137 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || || || || ||||||||||| | |||||||| || || Sbjct 7216 CAGATTTTCGTGAAGACGCTTACCGGCAAAACGATCACATTGGAGGTGGAGTCTTCGGAT 7275 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||||||||| || || || || || ||||| ||| Sbjct 7276 ACCATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCGCCTGACCAACAA 7335 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || ||| | || ||||| | || ||| | ||||| ||| | Sbjct 7336 CGCCTGATCTTTGCTGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTACAACATT 7395 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || ||||| ||| Sbjct 7396 CAGAAGGAGTCGACGCTTCACCTTGTCTTG 7425 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| ||||| || ||||| || || |||||||| || ||||| || ||| ||| Sbjct 7444 CAAATTTTTGTGAAGACCCTCACGGGTAAGACGATCACGCTGGAGGTTGAGTCCTCGGAC 7503 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| || || || || || || ||||| Sbjct 7504 ACGATCGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGGATTCCGCCTGATCAGCAG 7563 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||| | || || || | || || |||| || ||| || Sbjct 7564 CGCCTGATCTTCGCTGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAACATC 7623 Query 178104 CAAAAAGA 178111 || || || Sbjct 7624 CAGAAGGA 7631 Score = 116 bits (128), Expect = 9e-21 Identities = 139/188 (74%), Gaps = 8/188 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| |||| | | ||||||||||||||||| || ||| Sbjct 6721 CAGATCTTCGTCAAGACCCTCACGGGAAGA-CTATCACCCTCGAGGTGGAGTCGTCCGAC 6779 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| || ||||||||||| || || ||||| || |||||||| Sbjct 6780 ACTATCGATAACGTCAAGGCGAAAATTCAGGACAAGGAGGGCATCCCGCCTGACCAGCAG 6839 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| |||| |||||| || || | ||||| |||| || ||| | Sbjct 6840 CGTCTTATCTTTGCCG-------GCTCGAGGACGGTCGCACTCTCTCCGACTACAACATT 6892 Query 178104 CAAAAAGA 178111 || || || Sbjct 6893 CAGAAGGA 6900 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| |||||||| ||||| || ||||| |||||||| ||| ||| ||| Sbjct 6423 CAGATCTTCGTGAAGACTCTCACTGGAAAGACCATCACGCTCGAGGTCGAATCCTCCGAC 6482 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| || ||||| || || Sbjct 6483 ACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGG 6523 >seq17864 Length=12555 Score = 87.8 bits (96), Expect = 4e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 177997 TCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCG 178056 ||||| || || |||||||| || |||||||| || ||||||||||| ||||||| | Sbjct 12361 TCAAATTAAGAATCCAGGACAAGGAGGGAATCCCGCCCGACCAGCAACGGTTTATCTTTG 12420 Query 178057 CCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAA 178116 | ||||| ||||||||||| || | ||||| ||| || ||| || | || | | Sbjct 12421 CTGGAAAGCAGCTCGAAGACGGCCGCACTCTCCGCGACTACAACATCGGGAGGGAGTGCA 12480 Query 178117 CACTGCATCTTGT 178129 |||| || ||||| Sbjct 12481 CACTCCACCTTGT 12493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203439662698182