Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20boninense_20[genbank_20GCA_5F001855635.1_202016-10-28] 18,903 sequences; 60,325,844 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq10137 156 4e-33 seq6477 149 6e-31 seq17864 89.7 5e-13 >seq10137 Length=11321 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| || || || |||||||||||||| ||||| || || ||| Sbjct 2702 CCACCACGGAGACGGAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCAGAG 2761 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || |||||| | || || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 2762 AGCGTGCGCCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGCGGA 2821 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| || | | | ||||| |||||| || Sbjct 2822 ATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCCGACGACTCGAC 2880 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || ||||| || ||||| |||||||||||||| Sbjct 2881 CTCCAAGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 2928 Score = 154 bits (170), Expect = 1e-32 Identities = 162/210 (77%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| ||||||||||||||||||||||| |||||||| |||||||| | || |||||| Sbjct 3010 AGATGAAGCGTGCTCTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGACCATCCTCGAGC 3069 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| || ||||| |||| |||||| ||||| | ||| | | |||||||||| ||| | Sbjct 3070 TGCTTACCAGCGAAGATCAAGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC-TGAAT 3128 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTA---TCGTTTT 41832 || || | ||| | | | ||||| ||||||||||| | || | || | || Sbjct 3129 CTTCGCCTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATAGTCTTCTT 3188 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| |||||| || || |||||||| Sbjct 3189 ACCCGTCAACGTCTTGACAAAGATCTGCAT 3218 Score = 107 bits (118), Expect = 2e-18 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 41663 AGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTG 41722 || ||| ||||||||| || || ||||| || || || || |||| || |||||||| Sbjct 3305 AGAGTGGACTCCTTCTGGATATTGTAGTCCGAAAGAGTACGGCCGTCCTCCAGCTGCTTA 3364 Query 41723 CCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGC 41782 ||||| || || || ||||| ||||| | || | || |||||||||| ||| || | Sbjct 3365 CCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCC 3424 Query 41783 TTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAG 41841 || | || | | | |||||| ||||||||||| | || || || || || |||| Sbjct 3425 TTGA-CGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAA 3483 Query 41842 CGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| |||||||| Sbjct 3484 GGTCTTCACGAAGATCTGCAT 3504 Score = 86.0 bits (94), Expect = 6e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||| || ||||||||| |||| ||||||||||| || ||||| Sbjct 3594 CTCCTTCTGAATGTTGTAGTCAGAAAGGGTGCGCCCGTCCTCGAGCTGCTTCCCAGCGAA 3653 Query 41731 TATCAGGC-GCTGTTGGTC 41748 || || | |||| ||||| Sbjct 3654 GATGAGACGGCTGCTGGTC 3672 >seq6477 Length=89905 Score = 149 bits (164), Expect = 6e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| || || || || ||||| ||||||||||||||| || || || Sbjct 7440 GCCTCCGCGCAGACGCAAGACAAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAATCCGA 7381 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || | || || | |||||| || || || |||||||| |||||||| | || Sbjct 7380 AAGGGTACGACCATCCTCCAACTGCTTCCCAGCAAAGATCAGGCGTTGTTGGTCAGGCGG 7321 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| | || || | || | | | || || ||||||| Sbjct 7320 AATGCCCTCCTTGTCC-TGAATCTTCGCCTTCACATTGTCGATGGTATCCGAAGACTCCA 7262 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || |||||||| || || |||||||| |||||||||||||| Sbjct 7261 CCTCCAATGTGATCGTTTTGCCGGTAAGCGTCTTCACGAAAATCTGCAT 7213 Score = 147 bits (162), Expect = 2e-30 Identities = 159/208 (76%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || |||||||||||||| ||||| ||||||||||| || ||| |||| || | | Sbjct 7646 AGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAAC 7587 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| || ||||| ||||||||||| || || | |||| | |||||||||| ||| | Sbjct 7586 TGCTTCCCAGCGAAGATCAGGCGCTGCTGATCAGGCGGAATCCCCTCCTTGTCC-TGAAT 7528 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | || | | | ||||| ||||| ||||||| ||| ||||| ||||| Sbjct 7527 CTTGGCCTTCACATTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTCTTACC 7468 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| || ||||| || ||||| |||||| Sbjct 7467 CGTGAGGGTCTTCACAAAAATTTGCATG 7440 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 16/229 (7%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | || || |||||| |||||||||||||| ||||||||| Sbjct 6930 CCGCCCCGAAGACGAAGGACGAGGTGCAGC------TCCTTCTGAATGTTGTAGTCGGAG 6877 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||| |||||| || || || ||||| ||||| | || Sbjct 6876 AGAGTGCGACCGTCCTCGA-------GCCGGCAAAGATAAGACGCTGCTGGTCAGGCGGG 6824 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| |||| || | ||| | | ||||||| ||||||||| Sbjct 6823 ATGCCCTCCTTGTCC-TGAATTTTCGCCTTGACGTTATCGATAGTGTCGGACGACTCCAC 6765 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 6764 CTCGAGGGTGATAGTCTT-CCCGTGAGGGTCTTGACGAAGATCTGCATG 6717 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 || || || ||| ||||||||| |||||||||||||| | |||||| | || || ||| Sbjct 7137 AGGTGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGACAAGGTGCGACCATCCTCAAGC 7078 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| |||||||| || || ||||| ||||| | || | | |||||||| | ||| | Sbjct 7077 TGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATCCCCTCCTTGT-CTTGAAT 7019 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || || | |||| | | | |||||| ||||| ||||| | || ||||| || || Sbjct 7018 CTTCGCCTTAACGTTGTCGATAGTGTCCGAAGACTCGACCTCGAGAGTGATCGTCTTTCC 6959 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| |||||| ||||| || ||||| Sbjct 6958 GGTCAACGTCTTCACGAAGATTTGCAT 6932 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||||||||| || || || || || Sbjct 6717 GCCTCCTCGGAGACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATATTGTAATCCGA 6658 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||| ||||| |||| |||||||||||||| ||||| |||| |||||| ||||| Sbjct 6657 GAGTGTGCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTC 6604 >seq17864 Length=12555 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| ||||| | ||| || || || |||| |||| || ||||| |||||| | Sbjct 12511 CCGCCGCGAAGACGCAGCACAAGGTGGAGTGTGCACTCCCTCCCGATGTTGTAGTCGCGG 12452 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| ||||||||||| || || || || | || || ||||| | || Sbjct 12451 AGAGTGCGGCCGTCTTCGAGCTGCTTTCCAGCAAAGATAAACCGTTGCTGGTCGGGCGGG 12392 Query 41756 ACGCTCTCCTTGTCCATGATTTTT 41779 | | |||||||||| |||| || Sbjct 12391 ATTCCCTCCTTGTCCTGGATTCTT 12368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462194763343600