Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2 141 1e-28 >seq2 Length=3722621 Score = 141 bits (156), Expect = 1e-28 Identities = 371/562 (66%), Gaps = 8/562 (1%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || || || ||| ||| | ||||||||| | || | ||||| || || || Sbjct 2460737 CAAGCACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGT 2460796 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 ||| |||||||| | ||| ||||| || ||||| || || ||||| || || ||||| || Sbjct 2460797 GAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAA 2460856 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT---GTC 24307 ||| || || || || || || ||||| | ||| | ||| | || ||| | ||| Sbjct 2460857 GAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAAAGCGGAATTCTTGTC 2460916 Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 24367 | ||||| | ||||| ||||||||||| || | ||||| || ||||| || || Sbjct 2460917 AGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGC 2460976 Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 24427 | |||||| || | | | || || | || ||||| || | || || Sbjct 2460977 GTCAAAGAGGTACTCACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 2461036 Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487 | || ||||| ||||| || || ||||| || ||||||||||| | ||||||| Sbjct 2461037 GGTCTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCCTCGGC 2461096 Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547 ||| || || | | || || || | | || || || || || ||||| ||| Sbjct 2461097 GGCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGC 2461156 Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AG---TTTAT 24603 || || || || | ||||| | |||| || || | |||| || || | Sbjct 2461157 GGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATC-GTTGTTGAGCCTGTTGT 2461215 Query 24604 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 24663 |||| |||| || ||| || || | ||||| || || | ||||| || || ||||||| Sbjct 2461216 TCCAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAAGAAGCCTCTG 2461275 Query 24664 CCTTTTTATACATATTCCAGAT 24685 |||| || ||||| | |||||| Sbjct 2461276 CCTTCTTGTACATTTGCCAGAT 2461297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720442242880