Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 >seq5 Length=2861455 Score = 116 bits (128), Expect = 4e-21 Identities = 168/233 (72%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 145992 CCTG-AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCC 146050 |||| || || || ||||||| ||| ||| |||| | ||||| ||||| || | Sbjct 9343 CCTGCAGTTGATCGACGCCCTCTCCCGAGTAGTCTGCATCACAGTCCTCGTACTTCGCTC 9402 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC-CCCGGGCTCCCTGTGCCCC 146109 ||||||| | ||| || || || |||||||| || ||||| ||| || | || || Sbjct 9403 CGAAGTGGCGCCATTGAAAGCCATAGACGGGGCCAAGGTCACCCTCGCGTCGA-TGACCG 9461 Query 146110 AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTC 146169 || || | ||||||||||| |||||||||| ||||||||||||||||||| || Sbjct 9462 AGGCCACGCTTCTCGAGGAAGTCCTTGGACCCGTTGCCGTCCCAGATCTTGACGCCTTTC 9521 Query 146170 GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTC 146222 |||||||| || ||||| ||||| || | |||||||| ||||| || Sbjct 9522 GCGGAGAGGAGCTTCGAGTCTGTGGAGCCGTGCACAAACCAGAGAAGCTCCTC 9574 Score = 98.7 bits (108), Expect = 1e-15 Identities = 215/318 (68%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||||| |||| || ||||||| || || || | || |||||| | | | Sbjct 8810 CATCTTCATGGCGATGCTCGGATGGGGGTCATAACCTTCGACGATAATGTCCTCGGACGT 8869 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCT 145664 ||| |||| || |||||| | || || ||| |||| || || ||||| || Sbjct 8870 GAATCCATCAATACTCTCCACGGGTCTTGCCCATCTAAGCTTGGGGAACGGGCGGGG-CT 8928 Query 145665 CCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 | | || |||||| |||| || ||||||| | ||||||| || ||||| || | Sbjct 8929 CACGTTCGAGCTGGGTGCGGAGGGCGTCAACGTGGTCGCGGTAGACATGGGCGTCACCGA 8988 Query 145724 GGACGTGGATGAAGTCCCCG---GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCA 145780 | ||||||| | | || || ||| | | |||| ||||| ||||||| || | Sbjct 8989 GC---TGGATGATGAGCTCGTGAGGATCGGTGTCGGTGACATGGGCAACCATGTGTGTGA 9045 Query 145781 GCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGT 145840 ||| || ||| || ||||| ||||| | || || || | ||| | |||||||||| Sbjct 9046 GCAAGGCATAGGATGCGATGTTAAAGGGGATGCCGAGGCCGAGGTCGGCAGAGCGCTGGT 9105 Query 145841 ACAGCTGGCAGGAGAGCT 145858 ||| |||||||||||| Sbjct 9106 ACATGAGGCAGGAGAGCT 9123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075649350240