Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 134 1e-26 seq3 127 2e-24 seq6 86.0 5e-12 >seq1 Length=4606855 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | | ||| || | ||| | ||| ||||| ||||| ||||||||||| Sbjct 1904267 TACCTCCCCGCAGACGCAAGACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCCG 1904208 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || |||||||||||| || |||||| |||| ||||| ||||| || || | Sbjct 1904207 AGAGAGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGTG 1904148 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | |||||||||||||| ||| || || || | |||| ||| || | ||||| Sbjct 1904147 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCGA 1904088 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | ||| ||||| || || || || || ||||||||||| Sbjct 1904087 CCTCCAGCGTGATCGTCTTGCCAGTAAGCGTCTTCACGAAAATCTGCAT 1904039 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||| |||||| || ||||| |||||| ||||| || ||||| | Sbjct 1903952 CTCCTTCTGGATGTTATAATCGGACAACGTGCGACCATCCTCAAGCTGCTTCCCAGCAAA 1903893 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||||| ||||||||||| ||||| || || ||||||||| || ||| ||||| | Sbjct 1903892 AATGAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCTTGGATCTTTGCCTTAACGTT 1903833 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| ||||||||||| || | || || || |||| || || || Sbjct 1903832 GTCGATCGTGTCCGAAGACTCGACCTCGAGAGTGATAGTCTTTCCTGTCAACGTCTTCAC 1903773 Query 118727 AAAAATCTGCAT 118738 ||||| ||||| Sbjct 1903772 GAAAATTTGCAT 1903761 Score = 100 bits (110), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||| || || |||||||| || | ||||| ||||| Sbjct 1904476 ACCAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTC 1904417 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 | ||| || || ||| ||||||| |||||||| || || || || ||||||||||| Sbjct 1904416 CAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTGTCCTG 1904357 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||||| | ||||||||| | || | ||| || Sbjct 1904356 AATCTTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTT 1904297 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || || ||||||||||| Sbjct 1904296 GCCCGTGAGGGTCTTGACGAAAATCTGCAT 1904267 >seq3 Length=3223173 Score = 127 bits (140), Expect = 2e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || ||||||||||| ||| | ||| || ||||| ||||| Sbjct 2802270 GTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGCTG 2802329 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| ||||||||||| ||||| || ||||||||||| ||| || || Sbjct 2802330 CTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATCTT 2802389 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| |||||| | | |||||| |||| ||| | || |||||||| Sbjct 2802390 CGCCTTCACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGT 2802449 Query 118715 CAGAGTTTTTACAAAAATCTGCATGGCT 118742 || || || || || ||||||||| || Sbjct 2802450 CAAGGTCTTCACGAAGATCTGCATGCCT 2802477 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || |||||||| || | |||||| |||||||||||| || || ||| | Sbjct 2801718 CTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAA 2801777 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||||||||||||||| || || || || ||||||||||| || || || || | Sbjct 2801778 GATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 2801837 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| ||| ||||| | ||| | || || || || || || || || Sbjct 2801838 GTCGATCGTGTCCGACGACTCAACCTCCAAGGTGATGGTCTTCCCCGTGAGCGTCTTGAC 2801897 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 2801898 GAAGATCTGCAT 2801909 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| || || ||||| ||||| | ||| || || || | Sbjct 2802001 CTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCAACTGCTTGCCCGCAAA 2802060 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 ||| | |||||||| || ||||| ||||||||||| || || || || || | Sbjct 2802061 GATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTGACATT 2802120 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| |||||| | ||| ||||||| || | ||| ||||| ||||| || ||||| Sbjct 2802121 GTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCCGTCAGCGTCTTTAC 2802180 Query 118727 AAAAATCTGCAT 118738 || || ||||| Sbjct 2802181 GAAGATTTGCAT 2802192 Score = 89.7 bits (98), Expect = 4e-13 Identities = 76/94 (81%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || |||||||||||| | ||||||| ||||||||||| || || Sbjct 2802556 GTCGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCG 2802615 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 || |||||||||||||||| |||||||| |||| Sbjct 2802616 GCAAAGATGAGACGCTGCTGGTCGGGAGGGATGC 2802649 >seq6 Length=2725691 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||| ||||| || ||||| || || |||||||| ||||| | ||||| |||||| Sbjct 356633 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGCGTGCGGCCATCCTC 356692 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| || || || |||| || |||||||| ||||| || |||| Sbjct 356693 GAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGGGGGATGC 356739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829575179952