Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 123 2e-23 seq3 120 2e-22 seq9 82.4 5e-11 >seq1 Length=4606855 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | || || || ||||| ||||||||||| || ||| ||| |||| |||||| Sbjct 1904472 AGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCCAAC 1904413 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 ||||| || ||||| ||||| ||||||||||| || | | ||||||||| ||| Sbjct 1904412 TGCTTCCCCGCGAAGATGAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTGTCCTGAATC 1904353 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | | | | |||| || | || ||||| |||| |||||| || ||||| Sbjct 1904352 TTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCTTGCCC 1904293 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || || |||||||| Sbjct 1904292 GTGAGGGTCTTGACGAAAATCTGCAT 1904267 Score = 105 bits (116), Expect = 4e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||||||||| || ||| |||| || | ||||||||| ||||| Sbjct 1903723 TCCTTCTGGATATTGTAGTCGGAAAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAG 1903664 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || || |||||||| | |||| | || ||| ||||| ||||| ||| | || Sbjct 1903663 ATCAGACGTTGCTGGTCAGGCGGG-ATGCCCTCTTTGTCCTGAATCTTCGCCTTAACATT 1903605 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | |||| ||| ||||| || | ||||| || ||||| ||||| || || || Sbjct 1903604 ATCGATGGTGTCGGACGACTCGACCTCAAGAGTGATAGTCTTGCCCGTGAGGGTCTTGAC 1903545 Query 34378 AAAGATCTGCAT 34389 |||||| ||||| Sbjct 1903544 AAAGATTTGCAT 1903533 >seq3 Length=3223173 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || |||| |||| |||| |||||| || ||||| Sbjct 2802283 TCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGCTGCTTCCCGGCGAAG 2802342 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | || |||||| || ||||| ||| | | | Sbjct 2802343 ATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATCTTCGCCTTCACGTTG 2802402 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| || ||||| || | |||||||| |||||||| | || ||||| Sbjct 2802403 TCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACG 2802462 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 2802463 AAGATCTGCAT 2802473 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | || || || ||||| ||||||||||| || ||| || | || Sbjct 2801698 AGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGCCCATCC 2801757 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||||||||| || | | ||||||||| Sbjct 2801758 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGAATACCCTCCTTGTCC 2801817 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | |||| || | ||| || || |||| |||||||| Sbjct 2801818 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACCTCCAAGGTGATGGTC 2801877 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || ||||| || || || ||||||||||| Sbjct 2801878 TTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 2801909 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | || || || ||||| ||||||||||| ||||| || |||| |||||| Sbjct 2801987 AGGTGAAGGGTGCTCTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCAAC 2802046 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| || || || | ||||||||||| || | || |||||| || ||| Sbjct 2802047 TGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATC 2802106 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | || | | || | |||| || || || || | ||||| || ||||| Sbjct 2802107 TTCGCCTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCC 2802166 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || || || ||||| ||||| Sbjct 2802167 GTCAGCGTCTTTACGAAGATTTGCAT 2802192 >seq9 Length=2326135 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||| |||| |||| |||| |||| | ||||| || ||||| || |||||||| ||| Sbjct 1957622 CCGACGCGAAGCCGCAGCCTGAGGTCGAGGGTACTCTCCTTCTGAATATTGTAGTCCGAC 1957681 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| |||| ||| || || ||||||||||| ||||||| || | || Sbjct 1957682 AGTGTGCGGCCGTCCTCCAGCTGTTTTCCAGCGAAAATGAGAAGCTGCTGATCTAGTGGA 1957741 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGC 34320 | | |||||| || || || | || |||||||| Sbjct 1957742 AGTCCCTCCTTCTCCTGGATGTTGTATTTGAGATCGGC 1957779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071385759360