Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 111 3e-19 seq4 95.1 2e-14 >seq2 Length=3722621 Score = 111 bits (122), Expect = 3e-19 Identities = 161/226 (71%), Gaps = 5/226 (2%) Strand=Plus/Minus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGA----TGCAAAGCAATAACGATTTGG 101906 |||||||||||||| | ||||| | |||| || ||| ||| || ||| | Sbjct 2460956 CATCAAGAAGAAGGCCGACTGGGCCCTCCGCTGGATCTCTGACAAG-AATTCCGCTTTCG 2460898 Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966 |||||| |||| ||||| ||||| || || || |||||||| |||| | ||||| | Sbjct 2460897 CGGAACGCCTTGTCGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCGT 2460838 Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026 | || |||||| ||||||| | || | |||| |||||||| | ||| || ||| ||| Sbjct 2460837 CTATCTTCTGGCTCAAGAAGCGCGGCTTGATGCCCGGTCTCACTTTCTCGAACGAGCTCA 2460778 Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | || | ||||| ||| | || ||||||||| ||| |||| || Sbjct 2460777 TCTCGCGCGACGAGGGTATGCACACCGACTTTGCGTGCTTGCTCTT 2460732 >seq4 Length=2972551 Score = 95.1 bits (104), Expect = 2e-14 Identities = 165/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || ||| || | || ||||| |||||| ||| || || ||||| ||||| ||| Sbjct 1423916 GTTGATCCCAATGCCCCCAGCCGTCTTGCTGATCATGGCACAGTCCTTGAGAGTCGAATA 1423975 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 |||||||| ||| ||||| | | | | ||||||||||||| | ||| || | Sbjct 1423976 GATACCCTCGATGGAGTCATCCTTCATACAAACAAGGAAGCACGAGCTCATTTGAGGGTT 1424035 Query 94899 GACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAG 94958 || ||| ||| || || ||||| || ||||| || || || || |||||||| Sbjct 1424036 AGGGGTGCCAGCATTGAAGAGGGTGGGTGATGCATGAGTGAAGTAACGCTCGGACATGAG 1424095 Query 94959 ATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 | ||||||| || |||| | |||||| | ||| || || ||||| || |||||||| Sbjct 1424096 GTTGTATGTTTGAAGGACACGCTCGATGTCGGCTCCATGGATACCGACGGCAACACGCAT 1424155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582022068980