Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 >seq2 Length=3722621 Score = 138 bits (152), Expect = 1e-27 Identities = 369/561 (66%), Gaps = 6/561 (1%) Strand=Plus/Plus Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 ||| || || || ||| ||| | ||||||||| | || | ||||| || || || Sbjct 2460737 CAAGCACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGT 2460796 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 ||| |||||||| | ||| ||||| || ||||| || || ||||| || || ||||| || Sbjct 2460797 GAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAA 2460856 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTC 36330 ||| || || || || || || ||||| | ||| | || | || ||| | | ||| Sbjct 2460857 GAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAAAGCGGAATTCTTGTC 2460916 Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390 | ||||| | ||||| ||||||||||| || | ||||| || ||||| || || Sbjct 2460917 AGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGC 2460976 Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 36450 | |||||| || | | | || || | || ||||| || | || || Sbjct 2460977 GTCAAAGAGGTACTCACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 2461036 Query 36451 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 36510 | || ||||| ||||| || || ||||| || ||||||||||| | ||||||| Sbjct 2461037 GGTCTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCCTCGGC 2461096 Query 36511 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 36570 ||| || || | | || || || | | || || || || || ||||| ||| Sbjct 2461097 GGCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGC 2461156 Query 36571 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTAGT-TTATT 36627 || || || || | ||||| | |||| || | ||| || | || || Sbjct 2461157 GGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCATCGTTGTTGAGCCTGTTGTT 2461216 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 ||| |||| || ||| || || | ||||| || || | ||||| || || |||||||| Sbjct 2461217 CCAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAAGAAGCCTCTGC 2461276 Query 36688 CTTTTTATACATATTCCAGAT 36708 ||| || ||||| | |||||| Sbjct 2461277 CTTCTTGTACATTTGCCAGAT 2461297 Score = 109 bits (120), Expect = 7e-19 Identities = 289/440 (66%), Gaps = 5/440 (1%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| | ||| ||||| ||| ||| | ||||| || | || | ||||| || Sbjct 2463238 AACAGGAGACAAGCGAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTCGAG 2463179 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 ||||| | |||||||| || |||||||| || ||||| || || || ||||| | || Sbjct 2463178 AACGTCAAGCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCAAAACACCCG 2463119 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 || ||||| || || ||||| || || ||||| | || | ||| | | ||| |||| Sbjct 2463118 GAGAAGAATATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCGAACACGG-ACTG 2463060 Query 36329 ----TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384 ||| |||||| | ||||||||||||||||| || | || || || ||||| Sbjct 2463059 GTCATCAGCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGATGCAGGGTATAGTCTC 2463000 Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444 || || | ||||| | | | || | || | | || || ||||| | ||| Sbjct 2462999 GATGGCGTCGAAGAGGAACGTCCTCTCGTCTGGGTCCCTGATGTAAGTGTCAATGAGAAG 2462940 Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504 || | || || || | |||||| || || || || || ||||| |||| || Sbjct 2462939 GGAGTAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGAAGCATCGCGC 2462880 Query 36505 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 36564 ||||| ||| || || || |||| || || | | || || || || || ||||| Sbjct 2462879 CTCGGCGGCCTGAACCTCGTTAGAAAACCGCTCGACGAGGTTCTCGTTGACGATACCGTC 2462820 Query 36565 ACTGGCTGCAAAAAACGCCA 36584 ||| |||||||| |||| Sbjct 2462819 CGAGGCCGCAAAAAAGGCCA 2462800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171516563040