Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 >seq2 Length=3722621 Score = 131 bits (144), Expect = 2e-25 Identities = 294/440 (67%), Gaps = 5/440 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||| ||||| ||| ||||| ||||| || | || || ||||| || Sbjct 2463238 AACAGGAGACAAGCGAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTCGAG 2463179 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 ||||| | |||||||| || |||||||| || ||||| || || || ||||| |||| Sbjct 2463178 AACGTCAAGCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCAAAACACCCG 2463119 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 || ||||| || || ||||| ||||| ||||| || || | ||| | ||| | ||| Sbjct 2463118 GAGAAGAATATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCG-AACACGGACTG 2463060 Query 50131 ----TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 50186 ||| |||||| | ||||||||||||||||| || | || || || || || Sbjct 2463059 GTCATCAGCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGATGCAGGGTATAGTCTC 2463000 Query 50187 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAG 50246 ||||| | ||||| | | | || | || | | ||||| || || | ||| Sbjct 2462999 GATGGCGTCGAAGAGGAACGTCCTCTCGTCTGGGTCCCTGATGTAAGTGTCAATGAGAAG 2462940 Query 50247 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGC 50306 || | || || || | |||||| || ||||| || || ||||| |||| || Sbjct 2462939 GGAGTAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGAAGCATCGCGC 2462880 Query 50307 CTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTC 50366 ||||| ||| || || || |||| || || | | || || || || || ||||| Sbjct 2462879 CTCGGCGGCCTGAACCTCGTTAGAAAACCGCTCGACGAGGTTCTCGTTGACGATACCGTC 2462820 Query 50367 ACTGGCTGCAAAAAACGCCA 50386 ||| |||||||| |||| Sbjct 2462819 CGAGGCCGCAAAAAAGGCCA 2462800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267399375840