Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq2 159 5e-34 >seq2 Length=3722621 Score = 159 bits (176), Expect = 5e-34 Identities = 374/562 (67%), Gaps = 8/562 (1%) Strand=Plus/Plus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 ||| || || || ||| ||||| |||||| || | || | ||||| || || || Sbjct 2460737 CAAGCACGCAAAGTCGGTGTGCATACCCTCGTCGCGCGAGATGAGCTCGTTCGAGAAAGT 2460796 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||| |||||||| | ||| ||||| || ||||| || |||||||| || || ||||| || Sbjct 2460797 GAGACCGGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATAGACGCGAAGGAACCAGAGAA 2460856 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTC 42237 |||||| || || || || || ||||| | ||| | || | || ||| | | ||| Sbjct 2460857 GAAGATACCCTCGACAGCAGCGAAGGCGACAAGGCGTTCCGCGAAAGCGGAATTCTTGTC 2460916 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 | ||||| | ||||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 2460917 AGAGATCCAGCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTCTCGATGGC 2460976 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 | |||||| || | | | || || | || |||||||| | || || Sbjct 2460977 GTCAAAGAGGTACTCACGCTGCCTGGGGTCCTTGATGTAGGTATCGATGAGGAGGGAGTA 2461036 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 | || ||||| ||||| || || || || || ||||||||||| | |||||||| Sbjct 2461037 GGTCTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCGTAGAAACAGCGGGCCTCGGC 2461096 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 |||| || || | | || || || | | || ||||| || || ||||| ||| Sbjct 2461097 GGCCTGGACCTCGTTGGAGAAACGCTCGACAAGGTTCTCGTTGACGATGCCGTCCGAGGC 2461156 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTAT 42533 || || || || | ||||| | |||| || | || |||| | || | Sbjct 2461157 GGCGAAGAAGGCAAGGACATGGGAGACGAAATGGCGCTCAT-CGTTGTTGAGCCTGTTGT 2461215 Query 42534 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTG 42593 |||| |||| || ||| || || | ||| | || || | ||||| || || || |||| Sbjct 2461216 TCCAGTCATGGAGATCCTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAAGAAGCCTCTG 2461275 Query 42594 CCTTTTTATACATATTCCAGAT 42615 |||| || ||||| | |||||| Sbjct 2461276 CCTTCTTGTACATTTGCCAGAT 2461297 Score = 127 bits (140), Expect = 3e-24 Identities = 293/440 (67%), Gaps = 5/440 (1%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| | ||| ||||| ||| ||||| |||||||| | || | ||||| || Sbjct 2463238 AACAGGAGACAAGCGAAGTCGGTGTGCATGCCCTCATCACGCGAGATGAGCTCGTTCGAG 2463179 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 ||||| | |||||||| || |||||||| || ||||| || || || ||||| | || Sbjct 2463178 AACGTCAAGCCGGGCATCAGCCCACGCTTCTTGAGCCAGAAGATTGAGGCAAAACACCCG 2463119 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 || ||||| || || ||||| || || ||||| | || | ||| | | ||| |||| Sbjct 2463118 GAGAAGAATATGCCCTCTACAGCGGCGAAGGCGACCAGCCGCTCAGCGAACACGG-ACTG 2463060 Query 42236 ----TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 ||| |||||| | ||||||||||||||||| || | || || || || || Sbjct 2463059 GTCATCAGCTATCCAGCGTAATGCCCAATCGGCCTTCTTCTTGATGCAGGGTATAGTCTC 2463000 Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 ||||| | ||||| | | | || | || | | || || || || | ||| Sbjct 2462999 GATGGCGTCGAAGAGGAACGTCCTCTCGTCTGGGTCCCTGATGTAAGTGTCAATGAGAAG 2462940 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 || | || || || | |||||| || ||||| || || ||||| |||| || Sbjct 2462939 GGAGTAGGTCTCGGAGTGGACGTTTTCGATCATGATCTGGAAGCCATAGAAGCATCGCGC 2462880 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 ||||| |||| || || || |||| || || | | || ||||| || || ||||| Sbjct 2462879 CTCGGCGGCCTGAACCTCGTTAGAAAACCGCTCGACGAGGTTCTCGTTGACGATACCGTC 2462820 Query 42472 ACTGGCTGCAAAAAACGCCA 42491 ||| |||||||| |||| Sbjct 2462819 CGAGGCCGCAAAAAAGGCCA 2462800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137891278560