Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2 197 2e-45 seq4 149 9e-31 >seq2 Length=3722621 Score = 197 bits (218), Expect = 2e-45 Identities = 395/575 (69%), Gaps = 18/575 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| || || || ||||| ||||||||||||||| |||| || Sbjct 2462673 ATATGGCAAATGTACAAGCGAGCACAAGCGTCCTTCTGGACGGTCGAAGAGATCGACCTC 2462732 Query 125079 TCCAAGGA----CCTGTAC--GATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT 125132 || | || || | || || ||||| ||| || || | ||||| | || Sbjct 2462733 TCGCATGATATTCCCG-ACTGGAATGGGAAGCTC-----ACAGATAGCGAGCGTCACTTC 2462786 Query 125133 ATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTT 125191 | || || | ||||||| ||||| | ||| || || ||||||||||| || || || Sbjct 2462787 CTCTCCTACGTCCTGGCCTTTTTTGCGGCCTCGGACGGTATCGTCAACGAGAACCTCGTC 2462846 Query 125192 GACACGATTCTCTCAAGAG-TTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAA 125250 || || || ||| | ||| || | || |||| | ||||| || || ||||| | Sbjct 2462847 GAG-CGGTTTTCTAACGAGGTTCAGGCCGCC-GAGGCGCGATGCTTCTATGGCTTCCAGA 2462904 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310 ||||||| || ||||| ||||| || | ||||| || ||||||| ||||| | | Sbjct 2462905 TCATGATCGAAAACGTCCACTCCGAGACCTACTCCCTTCTCATTGACACTTACATCAGGG 2462964 Query 125311 ATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369 | || | || | || | | |||| |||| ||||| || | || | || || Sbjct 2462965 ACCCAGA-CGAGAGGACGTTCCTCTTCGACGCCATCGAGACTATACCCTGCATCAAGAAG 2463023 Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 ||||| | |||| | || ||||| | ||| ||| |||| || ||| || | ||| Sbjct 2463024 AAGGCCGATTGGGCATTACGCTGGATAGCTGATGACCAGTCCGTGTTCGCTGAGCGGCTG 2463083 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || |||||||| ||||||||||| ||||| || || ||||||| | ||||| ||| Sbjct 2463084 GTCGCCTTCGCCGCTGTAGAGGGCATATTCTTCTCCGGGTGTTTTGCCTCAATCTTCTGG 2463143 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 ||||||||||| || || |||||||| ||||| | |||||| | || || || || Sbjct 2463144 CTCAAGAAGCGTGGGCTGATGCCCGGCTTGACGTTCTCGAACGAGCTCATCTCGCGTGAT 2463203 Query 125550 GAGGGCCTACACTGTGACTTTGCCATTCTACTGTT 125584 |||||| | ||| ||||| || ||| ||||| Sbjct 2463204 GAGGGCATGCACACCGACTTCGCTTGTCTCCTGTT 2463238 Score = 179 bits (198), Expect = 5e-40 Identities = 383/563 (68%), Gaps = 18/563 (3%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||| | || ||| | ||||| Sbjct 2461297 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCTTTCTGGACTGCTGAGGAGATGGATCTT 2461238 Query 125079 TCCAAGGACCTGTACGATTGGGAGA-CTCGTTTGACTGAAAC--TGAGCGAGAGTTTATA 125135 |||||||| || | || ||| | | | | | || ||| |||||| | || | Sbjct 2461237 TCCAAGGATCTCCATGACTGGAACAACAGGCTCAAC---AACGATGAGCGCCATTTCGTC 2461181 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGAC 125194 || || | | |||||||| |||| ||| || || ||||||||||| || || || || Sbjct 2461180 TCCCATGTCCTTGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTTGTCGAG 2461121 Query 125195 ACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAATC 125252 || ||||| | ||| | ||| || |||| || || ||||| ||||||||| Sbjct 2461120 -CGTTTCTCCAACGAGGT--CCAGGCCGCCGAGGCCCGCTGTTTCTACGGCTTCCAAATC 2461064 Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGAT 125312 ||||| |||||| | || || || | ||||| || || || | ||||| || Sbjct 2461063 ATGATGGAGAACATCCATTCCGAGACCTACTCCCTCCTCATCGATACCTACATCAAGGAC 2461004 Query 125313 CC---GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA 125369 || ||| ||| | || |||||| |||| ||||| ||| | || | || || Sbjct 2461003 CCCAGGCAGCGTGAGTAC---CTCTTTGACGCCATCGAGACGATCCCTTGCATCAAGAAG 2460947 Query 125370 AAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTG 125429 ||||| | |||| | || |||||| |||| | || || | | ||| || | || Sbjct 2460946 AAGGCCGACTGGGCCCTCCGCTGGATCTCTGACAAGAATTCCGCTTTCGCGGAACGCCTT 2460887 Query 125430 GTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGG 125489 || || ||||| || || ||||| |||||||| || ||| || ||| | ||||| ||| Sbjct 2460886 GTCGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCGTCTATCTTCTGG 2460827 Query 125490 CTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGAC 125549 |||||||||||||| | |||||||| || || | |||||| | || || || ||| Sbjct 2460826 CTCAAGAAGCGCGGCTTGATGCCCGGTCTCACTTTCTCGAACGAGCTCATCTCGCGCGAC 2460767 Query 125550 GAGGGCCTACACTGTGACTTTGC 125572 ||||| | ||| |||||||| Sbjct 2460766 GAGGGTATGCACACCGACTTTGC 2460744 >seq4 Length=2972551 Score = 149 bits (164), Expect = 9e-31 Identities = 257/368 (70%), Gaps = 4/368 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || || ||||| || || || ||||| | ||| ||||| | ||||| |||||||| ||| Sbjct 1423752 CAAGGTGGCAACAAGCGCCCTGGCGCGTTCGCCATCTACCTCGAACCCTGGCACGCCGAC 1423693 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 | || || || ||||| ||||||| ||| ||| || |||| |||||| | ||| Sbjct 1423692 ATCTTCGAGTTCATCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTTCGAGCCCGTGAC 1423633 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 | || || || || ||| | || ||| ||||||||||||||||| | |||||| | Sbjct 1423632 CTCTTCTACGCGCTTTGGATCCCCGATCTGTTCATGAAGCGCGTCGAGTCTGGTGGCAAA 1423573 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 ||| || | ||||| || |||| ||||| ||| |||||| || |||||| Sbjct 1423572 TGGTCTCTCTTCTGCCCAAACGAAGCACCTGGTCTCCACGAAGTCTGGGGTGATGAGTTT 1423513 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 ||||| ||| | ||||||| ||||| || ||| |||| | |||| || | Sbjct 1423512 GAGGCACTCTACGAGCAGTACGAGCGCGAGGGTCGCGCACGGAAGACTA-TCGAGGCTC- 1423455 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | |||||| || ||| || | |||||||| ||| | ||| |||| Sbjct 1423454 AGAAGCTTTGGTACGCCATCCTGGAGGCCCAAATCGAGACTGGTGGTCCTTTCATGCTCT 1423395 Query 97234 ACAAGGAT 97241 | |||||| Sbjct 1423394 ATAAGGAT 1423387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057754934560