Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 seq2 89.7 1e-12 >seq1 Length=4606855 Score = 118 bits (130), Expect = 2e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || | ||| | || || || ||||| ||||| ||||| || || || | |||||| Sbjct 1903745 AAGGACCAAATGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGAAAGGGTACGACCGTC 1903686 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || || || || | || || ||||| || || || ||||| || Sbjct 1903685 CTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGGGATGCCCTCTTTGTC 1903626 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || ||||| || | ||| ||| | || ||||| || || ||||| Sbjct 1903625 CTGAATCTTCGCCTTAACATTATCGATGGTGTCGGACGACTCGACCTCAAGAGTGATAGT 1903566 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || || || || ||||| || ||||| Sbjct 1903565 CTTGCCCGTGAGGGTCTTGACAAAGATTTGCAT 1903533 Score = 113 bits (124), Expect = 1e-19 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || || || | ||| || || || || || || || || || ||||| | ||| || || Sbjct 1904247 ACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCCGAGAGAGTACGACCATCCTCG 1904188 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || ||||| || || || | || || ||||| || || || || || |||||| Sbjct 1904187 AGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGA 1904128 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || || || || || | |||||| || || ||||| || || || ||||| Sbjct 1904127 ATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCGACCTCCAGCGTGATCGTCTTG 1904068 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATT 104560 |||||||| || || || || ||||||||| Sbjct 1904067 CCAGTAAGCGTCTTCACGAAAATCTGCATT 1904038 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || ||||| || || | || | ||| || || || || || ||||||||| Sbjct 1903951 TCCTTCTGGATGTTATAATCGGACAACGTGCGACCATCCTCAAGCTGCTTCCCAGCAAAA 1903892 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| ||||||||||| || ||||| || || || |||||||| || || || Sbjct 1903891 ATGAGGCGCTGCTGATCAGGAGGGATCCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTG 1903832 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || || || ||||| || || |||||||| || || | || || || Sbjct 1903831 TCGATCGTGTCCGAAGACTCGACCTCGAGAGTGATAGTCTTTCCTGTCAACGTCTTCACG 1903772 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 1903771 AAAATTTGCAT 1903761 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || |||||||| || || | ||||| || | || || || || || Sbjct 1904457 TCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCCAACTGCTTCCCCGCGAAG 1904398 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || ||||| || || || || || ||||||||||| || || || || Sbjct 1904397 ATGAGGCGCTGCTGGTCAGGCGGAATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG 1904338 Query 104489 TCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | ||| || ||||| || || || ||||| || || || || || || Sbjct 1904337 TCGATCGTGTC-CGAGGACTCGACCTCCAGCGTGATCGTCTTGCCCGTGAGGGTCTTGAC 1904279 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 1904278 GAAAATCTGCAT 1904267 >seq2 Length=3722621 Score = 89.7 bits (98), Expect = 1e-12 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || ||||||||||| || |||||||| || |||| ||||||| | ||||| ||| Sbjct 2463084 GTCGCCTTCGCCGCTGTAGAGGGCATATTCTTCTCCGGGTGTTTTGCCTCAATCTTCTGG 2463143 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 | ||||| | || || ||||| || || || ||||| ||||| | || | || Sbjct 2463144 CTCAAGAAGCGTGGGCTGATGCCCGGCTTGACGTTCTCGAACGAGCTCATCTCGCGTGAT 2463203 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGT 269284 || || | ||| ||||||||||||| Sbjct 2463204 GAGGGCATGCACACCGACTTCGCTTGT 2463230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396098642448