Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5 118 7e-22 >seq5 Length=2861455 Score = 118 bits (130), Expect = 7e-22 Identities = 209/300 (70%), Gaps = 10/300 (3%) Strand=Plus/Plus Query 25668 AGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGC 25727 |||||||||||||| | |||||||| | ||| ||||| || | |||| | || Sbjct 9278 AGGGTTCCAGGCGCTGAGGATGATGCGACGGTCAGTTGGGTCGTGCTTGAT----TTTGC 9333 Query 25728 GG-TG---TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCA-TGTCCGTG 25782 || || | ||||| ||||| || ||| ||||||||||||| | ||| |||| | Sbjct 9334 GGATGCACTCCTGCAGTTGATCGACGCCCTCTCCCGAGTAGTCTG-CATCACAGTCCTCG 9392 Query 25783 TACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCC 25842 |||| |||||||| | | ||| || || || || || || || ||||| || || Sbjct 9393 TACTTCGCTCCGAAGTGGCGCCATTGAAAGCCATAGACGGGGCCAAGGTCACCCTCGCGT 9452 Query 25843 CTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTT 25902 | || | | ||| | ||| || | ||||| |||| || ||| ||||||||||||| Sbjct 9453 CGATGACCGAGGCCACGCTTCTCGAGGAAGTCCTTGGACCCGTTGCCGTCCCAGATCTTG 9512 Query 25903 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 || || ||| ||||||| || |||| |||||| || || ||||| || |||||| Sbjct 9513 ACGCCTTTCGCGGAGAGGAGCTTCGAGTCTGTGGAGCCGTGCACAAACCAGAGAAGCTCC 9572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136953313388