Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 248 2e-60 >seq4 Length=2972551 Score = 248 bits (274), Expect = 2e-60 Identities = 895/1402 (64%), Gaps = 60/1402 (4%) Strand=Plus/Minus Query 363735 TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 ||||||| ||||| || ||||| || || | ||||| ||||| ||||| | || Sbjct 1423834 TTACATTGCGGGCACCAACGGTTACTCCAACGGAATTGTTCCTATGCTCCGTGTCTACGA 1423775 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | ||| ||| |||| ||||| || ||||| |||||| || ||||| || || || Sbjct 1423774 CGCTACCGCGCGGTATGTCGATCAAGGTGGCAACAAGCGCCCTGGCGCGTTCGCCATCTA 1423715 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 ||||| || || ||||| || || ||||| | || || || || ||| || || Sbjct 1423714 CCTCGAACCCTGGCACGCCGACATCTTCGAGTTCATCGACCTGCGCAAGAACCACGGCAA 1423655 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||||| | || || ||||| || ||||| || |||||| | | || | || ||||| Sbjct 1423654 GGAGGAGGTTCGAGCCCGTGACCTCTTCTACGCGCTTTGGATCCCCGATCTGTTCATGAA 1423595 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 |||||| ||| | ||| || ||||| ||||| |||||| ||||| || ||||| Sbjct 1423594 GCGCGTCGAGTCTGGTGGCAAATGGTCTCTCTTCTGCCCAAACGAAGCACCTGGTCTCCA 1423535 Query 364035 CGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGC 364094 ||| || |||||||| || | || || || ||||| |||| || ||||| || Sbjct 1423534 CGAAGTCTGGGGTGATGAGTTTGAGGCACTCTACGAGCAGTACGAGCGCGAGGGTCGCGC 1423475 Query 364095 TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 || ||||| || || |||||||| |||| |||||| |||| | || || ||||| Sbjct 1423474 ACGGAAGACTATCGAGGCTCAGAAGCTTTGGTACGCCATCCTGGAGGCCCAAATCGAGAC 1423415 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTC------------GTG--------------- 364187 || || | ||| | || || ||| | ||| Sbjct 1423414 TGGTGGTCCTTTCATGCTCTATAAGGATGCGGCCAACAGTAAGTGCACTTTCCATTGAAC 1423355 Query 364188 ----------------CAACC-------GCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 ||||| | ||||| ||||||||| | || || || || Sbjct 1423354 GCATGGCTACTACTGACAACCAATACAGGGAAGTCAAACCAGCAGAATCTCGGCACCATC 1423295 Query 364225 CAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 || | |||||||||||| |||||||| ||||| || | ||||| ||||||||||| Sbjct 1423294 AAGTCGTCCAACCTATGTACGGAGATTATCGAATATTCCTCCCCCGATGAGACTGCCGTC 1423235 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAG 364344 || || ||||| || ||||| |||| | || | | ||||| | | || | || Sbjct 1423234 TGCAATCTTGCATCCATCGCCATTCCCTCCTTCATCGAGGATGGCAAGTACAACTTCAAG 1423175 Query 364345 CATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAAT 364404 | || | | ||| || | || | | ||| ||| || |||||||| || Sbjct 1423174 AAGCTGCACGCCGTTGCCAAGGTTGTCGCCTTCAACCTCAACCGCATTATCGACGCCAAC 1423115 Query 364405 TATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGT 364464 || || || ||||| || ||| || || || ||||| ||||| || || || ||||| Sbjct 1423114 TACTACCCGATTCCCGAGGCCCGCCGCTCGAACATGCGCCATCGTCCCATCGGCATTGGT 1423055 Query 364465 GTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCT 364524 || ||||| ||||| |||| || ||| |||| ||| | ||||| || || || Sbjct 1423054 GTGCAGGGTCTCGCAGACGCCTTCATGGCGCTCCGTATGCCGTTTGACTCTATCGAGGCG 1422995 Query 364525 CGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGT 364584 || || ||| | |||||| || ||||| || ||||| | || ||| Sbjct 1422994 CGAAAGCTCAATCTGCAGATCTCCGAGACAATCTACCACGCCGCCGTCGAGGCAAGTTGT 1422935 Query 364585 GATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGG--GTCCCCTCTTTCGCAGG 364642 || ||||| | || | || ||| || || ||||| ||||| || |||| Sbjct 1422934 GAGATGGCACAGACTGATGGTCCCTACGAGACATACGAGGGTAGTCCC--GCGTCCCAGG 1422877 Query 364643 GAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGC 364702 | | |||| | || |||||| ||||| || | | | ||| |||||| | | Sbjct 1422876 GCCAGCTCCAATACGACCTATGGGGCGTCACTCCTACGGATCTTTGGGACTGGGCCAGTC 1422817 Query 364703 TACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCA 364762 | |||| || |||| || | | ||||| ||| | ||||||||||| | Sbjct 1422816 TCAAGGCCAAGGTCGCTCAGCACGGCCTTAGGAACTCGCTCCTCGTCGCGCCCATGCCTA 1422757 Query 364763 CGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATC 364822 | || || || | ||||| || || ||||||||||||||||| || | || ||||| Sbjct 1422756 CCGCCTCCACATCGCAGATTCTGGGCAACAACGAGTGCTTCGAGCCATACACCAGCAACA 1422697 Query 364823 TTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGG 364882 | ||| | || || || || | || || || | ||| || || || || | Sbjct 1422696 TCTATACCCGTCGCGTGCTCGCTGGCGAGTTCCAGGTCGTGTGCCCGTGGCTCCTCCGCG 1422637 Query 364883 ATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTAT-ATCATCGCCGCTAAT 364941 | || ||| | ||| |||||| || ||||||||| ||| || |||||| || Sbjct 1422636 AGCTCGTCGAGCTCGGCCTGTGGAACGATGACATGAAGAA-TATGATTATCGCCAACAAC 1422578 Query 364942 GGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGT 365000 || || | |||||||| || | | || || || | ||| | || ||||| ||||| Sbjct 1422577 GGGTCCATCCAGAACATCGACATTA-TCCCCGACGACGTCAAGGCGATCTACAAGACCGT 1422519 Query 365001 ATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCT 365059 ||||| ||||| || ||| || |||| | || || || || || || || |||| Sbjct 1422518 CTGGGAGATTTCACAGAAGAAGGTTC-TTGACCTCGCCGCGGACCGTGGCGCATTCATCT 1422460 Query 365060 GTCAGAGCCAGTCGTTTAACGT 365081 | ||| |||||| | ||||| Sbjct 1422459 GCCAGTCGCAGTCGCTCAACGT 1422438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350994921992