Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ganoderma_20sp._2010597_20SS1_20[JGI_20Gansp1_202011-03-16] 156 sequences; 39,522,573 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 120 3e-22 seq1 107 2e-18 seq6 86.0 6e-12 >seq3 Length=3223173 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| ||||||||||| ||| | || || |||||| |||||||| || Sbjct 2802277 GTGGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTACGGCCGTCCTCCAGCTGCTTCCCG 2802336 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | |||||||||||| || ||||| || || || || ||| ||| ||| Sbjct 2802337 GCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTATCTTGGATCTTCGCCTTC 2802396 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| |||||||| |||| ||| | ||| || ||||| | || Sbjct 2802397 ACGTTGTCGATGGTGTCGGAGGACTCGACTTCGAGGGTGATGGTCTTGCCGGTCAAGGTC 2802456 Query 131218 TTTACGAAAATCTGCATGACT 131238 || ||||| ||||||||| || Sbjct 2802457 TTCACGAAGATCTGCATGCCT 2802477 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| || || |||||| |||||| | ||||||||| || | Sbjct 2802001 CTCCTTCTGAATGTTGTAGTCAGACAGGGTGCGACCGTCCTCCAACTGCTTGCCCGCAAA 2802060 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| || ||||||||||| |||||||| || || || || ||| ||| ||||| | Sbjct 2802061 GATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTGACATT 2802120 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||| | |||| || | || || || || || || ||||| Sbjct 2802121 GTCGATGGTGTCGGAAGACTCCACCTCGAGAGTGATCGTCTTGCCCGTCAGCGTCTTTAC 2802180 Query 131223 GAAAATCTGCAT 131234 ||| || ||||| Sbjct 2802181 GAAGATTTGCAT 2802192 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | ||| |||||| || |||||||| || Sbjct 2801683 CCACCACGGAGACGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 2801742 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||||||||| || || Sbjct 2801743 AGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGA 2801802 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||| | Sbjct 2801803 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGACGACTCAACC 2801862 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| |||||||| Sbjct 2801863 TCCAAGGTGATGGTCTTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 2801909 Score = 96.9 bits (106), Expect = 3e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| || |||||||||||| | |||||| |||||| ||||||||||| Sbjct 2802555 GGTCGACTCCTTCTGGATGTTGTAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCC 2802614 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 || |||| | |||||||||||| |||||||| Sbjct 2802615 GGCAAAGATGAGACGCTGCTGGTCGGGAGGGAT 2802647 >seq1 Length=4606855 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || ||||| | || |||||||| || || ||||| ||| Sbjct 1903759 CCACCGCGGAGACGAAGGACCAAATGAAGCGTTGACTCCTTCTGGATATTGTAGTCGGAA 1903700 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | ||| |||||||| || ||| Sbjct 1903699 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGCGGG 1903640 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| || ||| ||| | | || | || |||| ||||||| Sbjct 1903639 ATGCCCTCTTTGTCCTGAATCTTCGCCTTAACATTATCGATGGTGTCGGACGACTCGACC 1903580 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || || || || ||||| Sbjct 1903579 TCAAGAGTGATAGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCAT 1903533 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| ||||| || | || | |||||||||||||| ||||||||||| Sbjct 1904265 CCTCCCCGCAGACGCAAGACAAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAATCCGAG 1904206 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| ||||||||||| ||| |||| | ||| |||||||| || ||| Sbjct 1904205 AGAGTACGACCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGTTGCTGGTCAGGTGGG 1904146 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||| | | || | ||||| | ||||||| Sbjct 1904145 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTATCAGAAGACTCGACC 1904086 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || |||||||||||||| Sbjct 1904085 TCCAGCGTGATCGTCTTGCCAGTAAGCGTCTTCACGAAAATCTGCAT 1904039 >seq6 Length=2725691 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | ||| |||||||| || |||||||| ||||| Sbjct 356616 CCACCACGGAGGCGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTA 356675 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | ||||||||||| || ||| Sbjct 356676 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGGGGG 356735 Query 131128 AT 131129 || Sbjct 356736 AT 356737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011879575040